Factsheet for TraesCS6A01G314700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G294000.1	Wheat	mitochondrion	96.83	96.83
TraesCS6B01G344700.2	Wheat	mitochondrion	96.03	95.65
HORVU6Hr1G077460.3	Barley	plastid	94.05	89.43
Os03t0581600-01	Rice	mitochondrion	76.19	84.21
EES12861	Sorghum	mitochondrion	80.95	83.61
Zm00001d026307_P001	Maize	mitochondrion	76.59	78.46
Bra001218.1-P	Field mustard	cytosol	40.08	71.63
CDY34929	Canola	cytosol	39.68	71.43
CDX74079	Canola	cytosol	40.87	70.07
GSMUA_Achr8P22480_001	Banana	mitochondrion	69.44	67.57
GSMUA_Achr11P...	Banana	mitochondrion	66.67	66.4
VIT_05s0077g01880.t01	Wine grape	mitochondrion	68.25	66.15
AT3G06790.2	Thale cress	mitochondrion	61.51	63.52
CDY08033	Canola	mitochondrion	53.17	62.33
PGSC0003DMT400043314	Potato	mitochondrion, plastid	64.29	62.31
Solyc01g066060.2.1	Tomato	plastid	63.89	62.16
Bra040292.1-P	Field mustard	mitochondrion, plastid	60.32	61.54
KRH50805	Soybean	mitochondrion	60.71	61.45
KRH02286	Soybean	mitochondrion	59.13	60.32
TraesCS2A01G437600.1	Wheat	plastid	32.94	38.78
TraesCS4A01G437100.1	Wheat	mitochondrion	33.73	36.17
TraesCS7A01G307000.1	Wheat	plastid	31.75	35.24
TraesCS6A01G005300.1	Wheat	plastid	34.92	35.2
TraesCS7A01G050200.1	Wheat	mitochondrion	32.94	35.17
TraesCS5A01G291000.1	Wheat	mitochondrion	44.05	27.89
TraesCS3A01G476100.2	Wheat	plastid	19.05	26.97
TraesCS7A01G262500.1	Wheat	mitochondrion	44.44	26.92
TraesCS4A01G203900.1	Wheat	nucleus	29.37	17.87

Protein Annotations

MapMan:16.12.5.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0050897	GO:GO:0080156	GO:GO:1900864	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	EnsemblPlantsGene:TraesCS6A01G314700
EnsemblPlants:TraesCS6A01G314700.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:551095517..551099458

Molecular Weight (calculated)

28221.7 Da

IEP (calculated)

9.930

GRAVY (calculated)

-0.629

Length

252 amino acids

Sequence
(BLAST)

001: MAAVAVTRRR LSALLHSSRA IPRRLLLLTG AAASAPSAHP SPWAPPSRGA KTALPGRPGY SPLNDPSPNW SNRPPKETIL LDGCDYEHWL IVMEFPADPK
101: PSEEDMVAAY VKTLTAVLGS EEEAKKKIYS VCTTTYTGFG ALISEELSYK VKGLPGVLWV LPDSYLDVPN KDYGGDLFVD GKVIHRPQFQ FTERQQVRSR
201: PRPRYDRRRE TMQVERRETM QRGPSVQEHR PPFSKQVAQN NGQHEIVPPG RN

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.