CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74079	Canola	cytosol	53.02	77.55
Bra001218.1-P	Field mustard	cytosol	49.3	75.18
AT3G06790.2	Thale cress	mitochondrion	84.19	74.18
CDY34929	Canola	cytosol	47.91	73.57
VIT_05s0077g01880.t01	Wine grape	mitochondrion	73.02	60.38
Os03t0581600-01	Rice	mitochondrion	63.72	60.09
KRH02286	Soybean	mitochondrion	67.91	59.11
KRH50805	Soybean	mitochondrion	67.91	58.63
Solyc01g066060.2.1	Tomato	plastid	69.3	57.53
PGSC0003DMT400043314	Potato	mitochondrion, plastid	69.3	57.31
EES12861	Sorghum	mitochondrion	63.26	55.74
GSMUA_Achr11P...	Banana	mitochondrion	65.58	55.73
GSMUA_Achr8P22480_001	Banana	mitochondrion	66.98	55.6
Zm00001d026307_P001	Maize	mitochondrion	63.26	55.28
TraesCS6B01G344700.2	Wheat	mitochondrion	63.26	53.75
TraesCS6D01G294000.1	Wheat	mitochondrion	62.79	53.57
TraesCS6A01G314700.1	Wheat	mitochondrion	62.33	53.17
HORVU6Hr1G077460.3	Barley	plastid	61.4	49.81
CDY20996	Canola	cytosol	33.49	47.06
CDX97960	Canola	cytosol	33.02	46.1
CDX79529	Canola	cytosol	24.19	42.98
CDY58181	Canola	cytosol	32.09	41.07
CDY49781	Canola	plastid	41.4	37.08
CDY23734	Canola	plastid	39.07	36.84
CDY17174	Canola	plastid	39.07	36.52
CDY37719	Canola	plastid	37.67	36.49
CDY19491	Canola	plastid	39.07	36.36
CDY37239	Canola	cytosol	21.86	35.88
CDX84224	Canola	mitochondrion, plastid	37.21	34.78
CDY31675	Canola	plastid	37.21	34.19
CDY65831	Canola	mitochondrion, plastid	35.35	34.08
CDY57037	Canola	mitochondrion	40.47	33.59
CDX79597	Canola	plastid	33.49	30.9
CDX72924	Canola	mitochondrion	25.58	30.05
CDY20096	Canola	plastid	42.79	29.3
CDX96416	Canola	mitochondrion	25.58	28.95
CDX97626	Canola	plastid	48.37	28.57
CDX98522	Canola	plastid	48.37	28.03
CDY65020	Canola	mitochondrion	24.19	27.37
CDX82454	Canola	mitochondrion, plastid	49.3	27.25
CDX68262	Canola	mitochondrion	23.72	26.84
CDX75801	Canola	mitochondrion, plastid	48.37	26.07
CDX84615	Canola	mitochondrion	20.93	25.14
CDY32326	Canola	cytosol	39.07	23.8
CDX98651	Canola	mitochondrion	33.02	21.98
CDX78969	Canola	mitochondrion	33.95	19.06
CDY50054	Canola	mitochondrion	33.02	18.68
CDY01629	Canola	mitochondrion	31.16	17.05
CDY60655	Canola	plastid	28.84	8.59

Protein Annotations

EnsemblPlants:CDY08033	EnsemblPlantsGene:GSBRNA2T00125281001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	ProteinID:CDY08033	ProteinID:CDY08033.1	SEG:seg
UniParc:UPI0004EE8753	UniProt:A0A078F8H5	MapMan:16.12.5.1	:	:	:

Description

BnaC03g34900DBnaC03g34900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8H5]

Coordinates

chrLK031982:+:723570..724506

Molecular Weight (calculated)

24044.7 Da

IEP (calculated)

9.566

GRAVY (calculated)

-0.527

Length

215 amino acids

Sequence
(BLAST)

001: MALFTARRKI ATVLSKTLSS SPPSSSLSTL SSRSRFAVPL IDKLSSTRTG LGPCYIPTRP KTSGSGYSPL NDPSPNWSNR PPKETILLDG CDYEHWLIVM
101: EFDDPKPTED EMINAYVKTL TSVVGRQEEA KKKIYSVSTS TYTGFGALIS EELSCKVKGL PGVLWVLPDS YLDVPNKDYG GDLYIEGKVI PRPQYRFTEQ
201: RQIRNRSRPR YDKAP

Best Arabidopsis Sequence Match ( AT3G06790.1 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGWQEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.