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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003876.1-P Field mustard mitochondrion 93.68 93.68
CDY65020 Canola mitochondrion 91.58 91.58
CDX72924 Canola mitochondrion 85.79 89.07
CDX96416 Canola mitochondrion 84.21 84.21
AT1G72530.2 Thale cress mitochondrion 83.68 82.81
VIT_09s0002g01100.t01 Wine grape mitochondrion 57.37 51.42
CDX79529 Canola cytosol 19.47 30.58
CDY58181 Canola cytosol 26.32 29.76
CDY20996 Canola cytosol 23.16 28.76
CDX97960 Canola cytosol 23.16 28.57
CDX74079 Canola cytosol 21.58 27.89
CDY34929 Canola cytosol 20.0 27.14
CDY23734 Canola plastid 30.0 25.0
CDY17174 Canola plastid 30.0 24.78
CDY37719 Canola plastid 28.95 24.77
CDY19491 Canola plastid 30.0 24.68
CDY31675 Canola plastid 30.0 24.36
CDX84224 Canola mitochondrion, plastid 29.47 24.35
CDY65831 Canola mitochondrion, plastid 27.89 23.77
CDY08033 Canola mitochondrion 26.84 23.72
CDX79597 Canola plastid 28.95 23.61
CDY37239 Canola cytosol 15.26 22.14
CDY20096 Canola plastid 36.32 21.97
CDX97626 Canola plastid 40.0 20.88
CDX98522 Canola plastid 40.0 20.49
CDY49781 Canola plastid 25.79 20.42
CDX84615 Canola mitochondrion 18.42 19.55
CDX82454 Canola mitochondrion, plastid 40.0 19.54
CDX75801 Canola mitochondrion, plastid 40.0 19.05
CDY57037 Canola mitochondrion 25.26 18.53
CDY32326 Canola cytosol 27.37 14.73
CDX98651 Canola mitochondrion 23.16 13.62
CDX78969 Canola mitochondrion 24.74 12.27
CDY50054 Canola mitochondrion 24.21 12.11
CDY01629 Canola mitochondrion 23.16 11.2
CDY60655 Canola plastid 24.74 6.51
Protein Annotations
EnsemblPlants:CDX68262EnsemblPlantsGene:GSBRNA2T00099543001PANTHER:PTHR31346PANTHER:PTHR31346:SF6ProteinID:CDX68262ProteinID:CDX68262.1
SEG:segUniParc:UPI0004EE727DMapMan:16.12.5.1:::
Description
BnaA07g23020D
Coordinates
chrLK031787:-:4684599..4685732
Molecular Weight (calculated)
21630.8 Da
IEP (calculated)
9.259
GRAVY (calculated)
-0.508
Length
190 amino acids
Sequence
(BLAST)
001: MASIIRRPSN LTAAVVGFRL TPLFPFSGNS LPVNSDTTRC SELIRVPSLV EGCDYKHWLV LMKPPNGYPP RNDIVQGFIR TLSMALGSEE EAKKSIYSVS
101: TKYYYAFGCR VHEHLTYKIR SLPDVRWVLP DSFIVDGGDS GYGGEPFVDG EVVPYDEKYH ADWLRDQTDE DAKNRVVKKK PRRKRNKTLN
Best Arabidopsis Sequence Match ( AT1G72530.1 )
(BLAST)
001: MARIIRRPLN LTAAVRFRLS PLSPFSGNSG SINSETTSWS ELIRVPSLVE GCDYKHWLVL MKPPNGYPTR NHIVQSFVET LAMALGSEEE AKRSIYSVST
101: KYYYAFGCRI HEPLTYKIRS LPDVKWVLPD SFIVDGDNRY GGEPFVDGEV VPYDEKYHAD WLRDQTDEDA KSGVVKKKHR RKRKKKLI
Arabidopsis Description
Plastid developmental protein DAG [Source:UniProtKB/TrEMBL;Acc:F4IDD2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.