CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98651	Canola	mitochondrion	77.35	94.12
Bra012522.1-P	Field mustard	mitochondrion, plastid	92.88	94.07
CDY50054	Canola	mitochondrion	80.15	82.89
CDX78969	Canola	mitochondrion	79.13	81.2
AT4G20020.1	Thale cress	mitochondrion	75.06	70.41
CDY20996	Canola	cytosol	19.59	50.33
CDX97960	Canola	cytosol	19.59	50.0
CDY37239	Canola	cytosol	14.25	42.75
VIT_12s0035g00240.t01	Wine grape	mitochondrion	43.26	42.18
CDY34929	Canola	cytosol	13.49	37.86
CDX74079	Canola	cytosol	13.74	36.73
CDX79529	Canola	cytosol	11.2	36.36
CDY58181	Canola	cytosol	15.52	36.31
CDY49781	Canola	plastid	21.88	35.83
Os11t0216400-01	Rice	mitochondrion	31.81	33.42
Zm00001d049043_P001	Maize	mitochondrion	34.86	33.41
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	36.13	33.02
TraesCS4D01G104800.2	Wheat	mitochondrion	34.86	32.93
KRH44085	Soybean	mitochondrion, plastid	38.68	32.9
CDY57037	Canola	mitochondrion	21.63	32.82
KRH26355	Soybean	mitochondrion	38.42	32.68
TraesCS4A01G203900.1	Wheat	nucleus	34.35	32.61
GSMUA_Achr1P22060_001	Banana	mitochondrion	32.06	32.31
TraesCS4B01G107700.2	Wheat	mitochondrion	34.86	31.64
CDY08033	Canola	mitochondrion	17.05	31.16
CDY37719	Canola	plastid	17.3	30.63
CDY65831	Canola	mitochondrion, plastid	17.3	30.49
EES08356	Sorghum	mitochondrion	34.35	30.13
PGSC0003DMT400057561	Potato	mitochondrion, plastid	35.88	30.0
CDY17174	Canola	plastid	17.56	30.0
Solyc02g079210.2.1	Tomato	plastid	34.61	29.57
CDY19491	Canola	plastid	17.3	29.44
CDY23734	Canola	plastid	17.05	29.39
CDX84224	Canola	mitochondrion, plastid	16.54	28.26
CDY31675	Canola	plastid	16.79	28.21
CDX79597	Canola	plastid	16.29	27.47
CDX72924	Canola	mitochondrion	11.7	25.14
CDY20096	Canola	plastid	19.85	24.84
CDX96416	Canola	mitochondrion	11.96	24.74
CDX97626	Canola	plastid	22.9	24.73
CDY60655	Canola	plastid	45.04	24.52
CDX84615	Canola	mitochondrion	10.94	24.02
CDX98522	Canola	plastid	22.65	23.99
CDY65020	Canola	mitochondrion	11.45	23.68
CDX82454	Canola	mitochondrion, plastid	23.16	23.39
CDX68262	Canola	mitochondrion	11.2	23.16
CDX75801	Canola	mitochondrion, plastid	23.16	22.81
CDY32326	Canola	cytosol	19.08	21.25

Protein Annotations

EnsemblPlants:CDY01629	EnsemblPlantsGene:GSBRNA2T00112685001	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:CDY01629	ProteinID:CDY01629.1
SEG:seg	UniParc:UPI0004EE8521	MapMan:16.12.5.1	:	:	:

Description

BnaC07g36190D

Coordinates

chrLK031927:-:1131532..1133522

Molecular Weight (calculated)

42428.3 Da

IEP (calculated)

6.146

GRAVY (calculated)

-0.785

Length

393 amino acids

Sequence
(BLAST)

001: MAMISHRLRR ALLTATSLLN RSISLFTSSV APTADFPLVQ RSVLARLTEV TTTRAPVRLF STRQYKLYKE GDEITEDTVL FEGCDFNHWL ITMDFPKDNP
101: LSPEEMVSTY EQTCAAGLGI SLEEAKTKMY ACSTTTYQGF QAIMTEQESE KFKDLPGVAF VLPDSYIDPV NKAYGGDKYE NGVITHRPPP IQANRRTRDK
201: FNQRSDRQGC GPQNFQRNNH YGQQPPMQGG GGGYGGPQQS YGPPGQGTQA PPPPFQGGYN QGPPRSPPPP YQAGYNQGQG SSVPPFQGPP GGYGQGGPSS
301: YSQGPQGGYN QGGPMNGNYG PAPGARNPNL GYGQGYAGPG QEVNQTIPQA DQRNAAGDWN NNNPAGQQGS DQVISVSTGE KILDRDMMLA AVE

Best Arabidopsis Sequence Match ( AT4G20020.1 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQV
401: RSRSIMNLAS FFFDILIRH

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.