CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78969	Canola	mitochondrion	96.32	95.56
CDY01629	Canola	mitochondrion	82.89	80.15
CDX98651	Canola	mitochondrion	66.58	78.33
AT4G20020.1	Thale cress	mitochondrion	78.95	71.6
CDY20996	Canola	cytosol	19.74	49.02
CDX97960	Canola	cytosol	19.74	48.7
VIT_12s0035g00240.t01	Wine grape	mitochondrion	45.53	42.93
CDY34929	Canola	cytosol	15.0	40.71
CDY37239	Canola	cytosol	13.95	40.46
CDX74079	Canola	cytosol	15.26	39.46
CDY58181	Canola	cytosol	16.32	36.9
CDX79529	Canola	cytosol	11.58	36.36
CDY49781	Canola	plastid	22.37	35.42
Os11t0216400-01	Rice	mitochondrion	33.16	33.69
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	37.89	33.49
TraesCS4D01G104800.2	Wheat	mitochondrion	36.58	33.41
Zm00001d049043_P001	Maize	mitochondrion	35.79	33.17
TraesCS4A01G203900.1	Wheat	nucleus	36.05	33.09
GSMUA_Achr1P22060_001	Banana	mitochondrion	33.95	33.08
CDY08033	Canola	mitochondrion	18.68	33.02
KRH44085	Soybean	mitochondrion, plastid	39.47	32.47
TraesCS4B01G107700.2	Wheat	mitochondrion	36.84	32.33
CDY57037	Canola	mitochondrion	21.84	32.05
KRH26355	Soybean	mitochondrion	38.95	32.03
CDY65831	Canola	mitochondrion, plastid	18.42	31.39
CDY37719	Canola	plastid	17.89	30.63
CDY17174	Canola	plastid	18.42	30.43
CDY23734	Canola	plastid	18.16	30.26
PGSC0003DMT400057561	Potato	mitochondrion, plastid	37.37	30.21
EES08356	Sorghum	mitochondrion	35.53	30.13
Solyc02g079210.2.1	Tomato	plastid	36.32	30.0
CDY19491	Canola	plastid	18.16	29.87
CDX84224	Canola	mitochondrion, plastid	17.63	29.13
CDY31675	Canola	plastid	17.63	28.63
CDX79597	Canola	plastid	17.11	27.9
CDX72924	Canola	mitochondrion	12.63	26.23
CDX96416	Canola	mitochondrion	12.89	25.79
CDY60655	Canola	plastid	48.68	25.62
CDY20096	Canola	plastid	20.79	25.16
CDX97626	Canola	plastid	23.95	25.0
CDY65020	Canola	mitochondrion	12.37	24.74
CDX98522	Canola	plastid	23.68	24.26
CDX68262	Canola	mitochondrion	12.11	24.21
CDX84615	Canola	mitochondrion	11.32	24.02
CDX82454	Canola	mitochondrion, plastid	24.21	23.65
CDX75801	Canola	mitochondrion, plastid	24.21	23.06
CDY32326	Canola	cytosol	20.0	21.53

Protein Annotations

EnsemblPlants:CDY50054	EnsemblPlantsGene:GSBRNA2T00095815001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:CDY50054	ProteinID:CDY50054.1	SEG:seg
UniParc:UPI0004EE3574	UniProt:A0A078IL13	MapMan:16.12.5.1	:	:	:

Description

BnaCnng18610DBnaCnng18610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IL13]

Coordinates

chrLK032877:-:24290..26341

Molecular Weight (calculated)

41062.5 Da

IEP (calculated)

8.491

GRAVY (calculated)

-0.999

Length

380 amino acids

Sequence
(BLAST)

001: MAMYSHRLRR ALLTTTSCLN RSITLSSVAP TSVTPSVSTV LQRSVLGRFT EATRAPMRLF STRQYKLYKE GDEITENTVL FEGCDYNHWL ITMDFPKDNP
101: LSPEEMVSTY EKTCAAGLGI SLEEAKKKIY ACSTTTYQGF QAIMTEEESE KFKDLPGVVF ILPDSYIDPA NKEYGGDKYE NGVITHRPPP FQPNRRQPRD
201: KFNQRPDRQG GPQNFQRNPQ YGQQPPMQGG GGGGYGGPQQ SYGPPGQAPP PPFQGGYNQG PPRSPPPPYQ GGYNQGQGSP VPPYQGPPGG YGQGGPGNFN
301: QGPQGGYNQG GPRNYGPQGA GNYGPAPGAG APNPGFGQGY GGPGQEQNQT FPQGDPRNVA GDWNNNTPAG QPGPDQGRRY

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.