CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26355	Soybean	mitochondrion	88.74	88.74
VIT_12s0035g00240.t01	Wine grape	mitochondrion	39.83	45.66
CDX98651	Canola	mitochondrion	28.79	41.18
KRH10700	Soybean	nucleus, plastid	19.05	39.64
KRH21628	Soybean	nucleus, plastid	19.26	39.56
CDY50054	Canola	mitochondrion	32.47	39.47
Bra012522.1-P	Field mustard	mitochondrion, plastid	32.68	38.92
CDX78969	Canola	mitochondrion	32.25	38.9
CDY01629	Canola	mitochondrion	32.9	38.68
Bra013439.1-P	Field mustard	mitochondrion	32.03	38.44
Solyc02g079210.2.1	Tomato	plastid	35.71	35.87
Os11t0216400-01	Rice	mitochondrion	28.57	35.29
TraesCS4A01G203900.1	Wheat	nucleus	31.6	35.27
PGSC0003DMT400057561	Potato	mitochondrion, plastid	35.71	35.11
AT4G20020.1	Thale cress	mitochondrion	31.82	35.08
GSMUA_Achr1P22060_001	Banana	mitochondrion	29.22	34.62
TraesCS4D01G104800.2	Wheat	mitochondrion	31.17	34.62
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	32.03	34.42
TraesCS4B01G107700.2	Wheat	mitochondrion	31.6	33.72
Zm00001d049043_P001	Maize	mitochondrion	29.87	33.66
KRH50805	Soybean	mitochondrion	17.53	32.53
KRH02286	Soybean	mitochondrion	17.32	32.39
KRG92352	Soybean	mitochondrion, plastid	16.45	32.07
KRH31686	Soybean	mitochondrion	14.72	30.49
EES08356	Sorghum	mitochondrion	29.22	30.13
KRH34443	Soybean	plastid	15.8	27.65
KRH21995	Soybean	plastid	20.56	23.69
KRH27318	Soybean	nucleus	18.4	23.42
AT5G44780.1	Thale cress	mitochondrion	33.55	21.44
CDY60655	Canola	plastid	32.47	20.78
Bra025105.1-P	Field mustard	mitochondrion	32.03	20.19

Protein Annotations

EMBL:ACUP02004908	EnsemblPlants:KRH44085	EnsemblPlantsGene:GLYMA_08G188700	EntrezGene:100813339	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:KRH44085
ProteinID:KRH44085.1	SEG:seg	UniParc:UPI00023C66A2	UniProt:I1KUP2	MapMan:16.12.5.1	:

Description

hypothetical protein

Coordinates

chr8:+:15128761..15131384

Molecular Weight (calculated)

51825.6 Da

IEP (calculated)

9.189

GRAVY (calculated)

-1.148

Length

462 amino acids

Sequence
(BLAST)

001: MASSSLIRLR RTIRTLSGIS HSLSATHAAS FSSPIGCGVS WSLQSPKKGV VQSRSFRSSS ISLLSFRSSQ RQNNIPDEIG PDTILFEGCD YNHWLIVMEF
101: KDNNKPSPED MVRVYEETCA KGLNISLEEA KKKMYACSTT TYIGFQAVMT EEESKKFEGL PGVVFVLPDS YIDPVNKQYG GDQYINGTII PRPPPVQYGR
201: NQGRRDWNKS PGQYNRHENP MPRPQGNPSF NSQGPMPGGG RNYGPSQNYP PQQNYGQATQ NYPPQQNYAQ ASQNYPPQQN YGQASQNYPP QQNYGQASQN
301: YPPQQNYGMT SQNYTPQQNY GQASPNYPPQ QKYGQAPQNY PPQQNFDQAP QNYPQQQRYG PSSPQYAQQQ SFGPPGQGER RNYMPQQNFG RPGQGERRDP
401: VPRHGASEVR GDTFTPSYAQ DFKPAYMEGF EQAKLGNHPA KEQAGSQQRY PPSGPGFTGE VW

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.