CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91356
KRH13399
KRH16959
KRH20755
KRH24006
KRH24392
KRH27971
KRH29310
KRH29374
KRH31661
KRH35470
KRH51475
KRH53667
KRH60786
KRH62918
KRH64261
KRH69115
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	KRH24006	AT3G48150.1	21798944
AT1G32580.1	KRH27971	AT3G48150.1	21798944
AT1G32580.1	KRH29310	AT3G48150.1	21798944
AT1G32580.1	KRH77487	AT3G48150.1	21798944
AT1G32580.1	KRH16959	AT3G49580.1	21798944
AT1G32580.1	KRH53667	AT3G49580.1	21798944
AT1G32580.1	KRH64261	AT3G49580.1	21798944
AT2G35240.1	KRH16959	AT3G49580.1	21798944
AT2G35240.1	KRH53667	AT3G49580.1	21798944
AT2G35240.1	KRH64261	AT3G49580.1	21798944
AT2G35240.1	KRG91356	AT4G14740.1	21798944
AT2G35240.1	KRH31661	AT4G14740.1	21798944
AT2G35240.1	KRH35470	AT4G14740.1	21798944
AT2G35240.1	KRH69115	AT4G14740.1	21798944
AT2G35240.1	KRH24392	AT4G39050.1	21798944
AT2G35240.1	KRH29374	AT4G39050.1	21798944
AT2G35240.1	KRH51475	AT4G39050.1	21798944
AT2G35240.1	KRH60786	AT4G39050.1	21798944
AT2G35240.1	KRH13399	AT5G13810.1	21798944
AT2G35240.1	KRH20755	AT5G13810.1	21798944
AT2G35240.1	KRH62918	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G032330.2	Barley	cytosol	40.08	87.16
CDX79529	Canola	cytosol	43.88	85.95
GSMUA_Achr6P01260_001	Banana	cytosol	53.16	85.71
KRH34443	Soybean	plastid	95.36	85.61
Os06t0116600-01	Rice	mitochondrion	59.49	85.45
GSMUA_Achr4P27580_001	Banana	cytosol	52.32	84.35
CDY37719	Canola	plastid	68.78	73.42
Bra021852.1-P	Field mustard	plastid	68.35	72.97
CDY23734	Canola	plastid	70.04	72.81
Bra005495.1-P	Field mustard	plastid	70.46	72.61
CDY17174	Canola	plastid	70.46	72.61
CDY19491	Canola	plastid	70.04	71.86
KRH31686	Soybean	mitochondrion	67.09	71.3
Zm00001d026243_P002	Maize	extracellular	64.98	70.97
TraesCS2D01G434600.1	Wheat	plastid	64.14	70.7
PGSC0003DMT400038117	Potato	plastid	68.78	70.56
EES11377	Sorghum	mitochondrion, plastid	64.14	70.37
TraesCS2A01G437600.1	Wheat	plastid	63.29	70.09
TraesCS2B01G457700.1	Wheat	plastid	62.87	69.63
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	68.78	69.07
Zm00001d045528_P001	Maize	mitochondrion	64.98	69.06
Solyc06g008220.2.1	Tomato	plastid	69.62	69.04
EER87743	Sorghum	mitochondrion	64.14	68.47
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	66.24	67.67
TraesCS4A01G437100.1	Wheat	mitochondrion	67.09	67.66
AT1G32580.1	Thale cress	mitochondrion, plastid	64.98	67.25
AT2G35240.1	Thale cress	mitochondrion, plastid	65.82	67.24
TraesCS7A01G050200.1	Wheat	mitochondrion	66.67	66.95
HORVU7Hr1G008880.2	Barley	plastid	67.09	66.25
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	68.35	62.55
TraesCS6D01G007100.1	Wheat	mitochondrion	62.45	61.41
TraesCS6A01G005300.1	Wheat	plastid	63.29	60.0
HORVU5Hr1G072150.9	Barley	mitochondrion	43.46	59.88
TraesCS6B01G010000.1	Wheat	plastid	63.29	59.76
HORVU6Hr1G002030.1	Barley	plastid	64.56	59.53
HORVU1Hr1G057120.1	Barley	plastid	32.07	49.67
TraesCS3A01G476100.2	Wheat	plastid	35.44	47.19
KRH02286	Soybean	mitochondrion	38.82	37.25
HORVU2Hr1G040170.17	Barley	mitochondrion	42.19	36.63
KRH50805	Soybean	mitochondrion	38.4	36.55
KRH21628	Soybean	nucleus, plastid	34.6	36.44
KRH10700	Soybean	nucleus, plastid	32.91	35.14
KRH27318	Soybean	nucleus	37.55	24.52
KRH21995	Soybean	plastid	37.13	21.95
KRH26355	Soybean	mitochondrion	33.76	17.32
KRH44085	Soybean	mitochondrion, plastid	32.07	16.45

Protein Annotations

EMBL:ACUP02012744	EnsemblPlants:KRG92352	EnsemblPlantsGene:GLYMA_20G206400	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF7	ProteinID:KRG92352	ProteinID:KRG92352.1
SEG:seg	UniParc:UPI00023DBEC7	UniProt:I1NI64	MapMan:16.12.5.1	:	:

Description

hypothetical protein

Coordinates

chr20:+:44323591..44327172

Molecular Weight (calculated)

26666.6 Da

IEP (calculated)

8.569

GRAVY (calculated)

-0.565

Length

237 amino acids

Sequence
(BLAST)

001: MARVISSSCA RLAMRLFSTT TTATAFAVTL PKPSSLSLSS RRFLFPLSHA IVPPSTRVAG IRCRVNRAGD SAYSPLNSGS SSSSFSDRPP TEMAPLFPGC
101: DYNHWLIVME NPGGEGANKQ QMIDCYIQTL AKVLGSEEEA KKKIYNVSCE RYFGFGCEID EETSNKLEGL PGVLFVLPDS YVDPENKDYG AELFVNGEIV
201: QRSPERQRRV EPQPQRHQDR PRYNDRTRYV RRRENMQ

Best Arabidopsis Sequence Match ( AT2G35240.1 )
(BLAST)

001: MAKTLSRSTA SCVAKRFFST SNAVASPSPL PSHLISRRFS PTIFHAVGYI PALTRFTTIR TRMDRSGGSY SPLKSGSNFS DRPPTEMAPL FPGCDYEHWL
101: IVMEKPGGEN AQKQQMIDCY VQTLAKIVGS EEEARKKIYN VSCERYFGFG CEIDEETSNK LEGLPGVLFV LPDSYVDPEF KDYGAELFVN GEVVPRPPER
201: QRRMVELTNQ RGSDKPKYHD RIRNVRRREN MR

Arabidopsis Description

MORF6MORF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VRA7]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.