Factsheet for VIT_07s0005g03930.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0116600-01	Rice	mitochondrion	60.17	86.06
GSMUA_Achr4P27580_001	Banana	cytosol	53.39	85.71
GSMUA_Achr6P01260_001	Banana	cytosol	53.39	85.71
CDX79529	Canola	cytosol	42.37	82.64
HORVU0Hr1G032330.2	Barley	cytosol	38.14	82.57
Zm00001d026243_P002	Maize	extracellular	67.37	73.27
VIT_05s0049g01500.t01	Wine grape	plastid	72.03	72.96
EES11377	Sorghum	mitochondrion, plastid	66.53	72.69
TraesCS2D01G434600.1	Wheat	plastid	65.25	71.63
CDY37719	Canola	plastid	67.37	71.62
TraesCS2A01G437600.1	Wheat	plastid	64.83	71.5
Bra021852.1-P	Field mustard	plastid	66.95	71.17
TraesCS2B01G457700.1	Wheat	plastid	64.41	71.03
CDY17174	Canola	plastid	69.07	70.87
Bra005495.1-P	Field mustard	plastid	69.07	70.87
PGSC0003DMT400038117	Potato	plastid	69.07	70.56
CDY19491	Canola	plastid	69.07	70.56
KRH31686	Soybean	mitochondrion	66.53	70.4
CDY23734	Canola	plastid	67.8	70.18
KRG92352	Soybean	mitochondrion, plastid	69.07	68.78
Solyc06g008220.2.1	Tomato	plastid	69.49	68.62
Zm00001d045528_P001	Maize	mitochondrion	64.41	68.16
EER87743	Sorghum	mitochondrion	63.98	68.02
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	65.68	66.81
TraesCS4A01G437100.1	Wheat	mitochondrion	66.1	66.38
PGSC0003DMT400060429	Potato	plastid	65.68	66.24
TraesCS7A01G050200.1	Wheat	mitochondrion	65.68	65.68
Solyc05g054960.2.1	Tomato	plastid	63.98	64.53
HORVU7Hr1G008880.2	Barley	plastid	65.25	64.17
TraesCS6D01G007100.1	Wheat	mitochondrion	63.98	62.66
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	67.8	61.78
KRH34443	Soybean	plastid	69.07	61.74
TraesCS6A01G005300.1	Wheat	plastid	64.41	60.8
TraesCS6B01G010000.1	Wheat	plastid	64.41	60.56
HORVU5Hr1G072150.9	Barley	mitochondrion	44.07	60.47
HORVU6Hr1G002030.1	Barley	plastid	65.25	59.92
HORVU1Hr1G057120.1	Barley	plastid	32.2	49.67
TraesCS3A01G476100.2	Wheat	plastid	35.17	46.63
HORVU2Hr1G040170.17	Barley	mitochondrion	42.8	37.0
VIT_05s0077g01880.t01	Wine grape	mitochondrion	39.83	36.15
VIT_19s0014g04710.t01	Wine grape	plastid	29.66	30.57
VIT_09s0002g01100.t01	Wine grape	mitochondrion	26.27	29.25
VIT_19s0014g01550.t01	Wine grape	plastid	39.83	22.33
VIT_12s0035g00240.t01	Wine grape	mitochondrion	30.51	17.87

Protein Annotations

ArrayExpress:VIT_07s0005g03930	EMBL:FN596502	EnsemblPlants:VIT_07s0005g03930.t01	EnsemblPlantsGene:VIT_07s0005g03930	EntrezGene:100248131	EntrezGene:LOC100248131
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346
PANTHER:PTHR31346:SF7	ProteinID:CCB60149	ProteinID:CCB60149.1	RefSeq:XP_002271431	RefSeq:XP_002271431.1	SEG:seg
UniParc:UPI00015CA941	UniProt:F6HZN4	wikigene:100248131	wikigene:LOC100248131	MapMan:16.12.5.1	:

Description

No Description!

Coordinates

chr7:-:6961252..6964146

Molecular Weight (calculated)

26894.0 Da

IEP (calculated)

9.513

GRAVY (calculated)

-0.697

Length

236 amino acids

Sequence
(BLAST)

001: MAAKISRSIM ALRSSSQSLL TLRSTPPLSS LSKRFLSSSL QQPRPVPVRF WPAIPLSSRL NQVRFRVNRA GKSGYSPLNS GSNFSDRPPT EMAPLFPGCD
101: YEHWLIVMDK PGGEGATKHQ MIDCYIQTLA KVVGSEEEAK KKIYNVSCER YFGFGCEIDE ETSNKLEDLP GVLFVLPDSY VDPENKDYGA ELFVNGEIVQ
201: RSPEQQRRVE PQPQTGRDRP KYNDRTRYVR RRENMR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.