Factsheet for Zm00001d026243_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013705_P001
Zm00001d013859_P002
Zm00001d017475_P002
Zm00001d030661_P001
Zm00001d032464_P008
Zm00001d033283_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	Zm00001d017475_P002	AT3G48150.1	21798944
AT2G35240.1	Zm00001d013705_P001	AT4G14740.1	21798944
AT2G35240.1	Zm00001d030661_P001	AT4G14740.1	21798944
AT2G35240.1	Zm00001d033283_P001	AT4G14740.1	21798944
AT2G35240.1	Zm00001d013859_P002	AT4G39050.1	21798944
AT2G35240.1	Zm00001d032464_P008	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11377	Sorghum	mitochondrion, plastid	94.93	95.37
TraesCS2D01G434600.1	Wheat	plastid	88.02	88.84
GSMUA_Achr6P01260_001	Banana	cytosol	59.91	88.44
TraesCS2A01G437600.1	Wheat	plastid	87.1	88.32
TraesCS2B01G457700.1	Wheat	plastid	86.64	87.85
GSMUA_Achr4P27580_001	Banana	cytosol	58.99	87.07
CDX79529	Canola	cytosol	46.54	83.47
Zm00001d045528_P001	Maize	mitochondrion	79.26	77.13
CDY58181	Canola	cytosol	55.3	71.43
Bra017328.1-P	Field mustard	cytosol	59.91	69.89
PGSC0003DMT400038117	Potato	plastid	74.19	69.7
Bra021852.1-P	Field mustard	plastid	70.05	68.47
CDY37719	Canola	plastid	70.05	68.47
CDY23734	Canola	plastid	71.43	67.98
CDY19491	Canola	plastid	72.35	67.97
CDY17174	Canola	plastid	71.89	67.83
Bra005495.1-P	Field mustard	plastid	71.89	67.83
VIT_05s0049g01500.t01	Wine grape	plastid	72.81	67.81
Solyc06g008220.2.1	Tomato	plastid	74.65	67.78
KRH31686	Soybean	mitochondrion	69.59	67.71
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	73.27	67.37
KRG92352	Soybean	mitochondrion, plastid	70.97	64.98
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	75.12	62.93
AT1G32580.1	Thale cress	mitochondrion, plastid	66.36	62.88
PGSC0003DMT400060429	Potato	plastid	66.36	61.54
Solyc05g054960.2.1	Tomato	plastid	65.9	61.11
CDX84224	Canola	mitochondrion, plastid	63.59	60.0
AT2G35240.1	Thale cress	mitochondrion, plastid	63.59	59.48
CDY31675	Canola	plastid	64.06	59.4
Bra005357.1-P	Field mustard	plastid	64.06	59.4
KRH34443	Soybean	plastid	71.89	59.09
Bra017613.1-P	Field mustard	plastid	18.43	58.82
CDY65831	Canola	mitochondrion, plastid	58.99	57.4
Bra036402.1-P	Field mustard	mitochondrion, plastid	58.99	57.4
HORVU1Hr1G057120.1	Barley	plastid	38.25	54.25
Bra023005.1-P	Field mustard	endoplasmic reticulum	20.74	48.39
CDX79597	Canola	plastid	50.69	47.21
CDX84615	Canola	mitochondrion	32.26	39.11
Zm00001d026307_P001	Maize	mitochondrion	38.25	33.74
Zm00001d024674_P001	Maize	plastid	33.18	32.29
Zm00001d048291_P001	Maize	mitochondrion	38.25	20.24
Zm00001d049043_P001	Maize	mitochondrion	31.8	16.83

Protein Annotations

EMBL:BT034459	EnsemblPlants:Zm00001d026243_P002	EnsemblPlants:Zm00001d026243_T002	EnsemblPlantsGene:Zm00001d026243	EntrezGene:100192474	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9
ProteinID:AQK45900.1	SEG:seg	UniParc:UPI00017B63DD	UniProt:B4FBH1	MapMan:16.12.5.1	:

Description

Multiple organellar RNA editing factor 2 chloroplastic

Coordinates

chr10:+:141735562..141738663

Molecular Weight (calculated)

24589.2 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.734

Length

217 amino acids

Sequence
(BLAST)

001: MATVARTLVA ACPARSLLRF RSRRLPSSSS IRPARQRAGV GSVRCMARRP DSSYSPLRSG QGGDRAPTEM APLFPGCDYE HWLIVMDKPG GEGATKQQMI
101: DCYIQTLAQV LGSEEEAKKK IYNVSCERYF GFGCEIDEET SNKLEGLPGV LFVLPDSYVD AENKDYGAEL FVNGEIVQRS PERQRRVEPV PQRAQDRPRY
201: SDRTRYVKRR ENQSYQR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.