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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS5A01G056700.2
TraesCS5A01G377600.1
TraesCS5B01G060100.2
TraesCS5B01G381200.1
TraesCS5D01G067900.2
TraesCS5D01G387600.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G32580.1 TraesCS6A01G251400.1 AT3G48150.1 21798944
AT1G32580.1 TraesCS6B01G273900.1 AT3G48150.1 21798944
AT1G32580.1 TraesCS6D01G233200.1 AT3G48150.1 21798944
AT2G35240.1 TraesCS5A01G056700.2 AT4G14740.1 21798944
AT2G35240.1 TraesCS5A01G377600.1 AT4G14740.1 21798944
AT2G35240.1 TraesCS5B01G060100.2 AT4G14740.1 21798944
AT2G35240.1 TraesCS5B01G381200.1 AT4G14740.1 21798944
AT2G35240.1 TraesCS5D01G067900.2 AT4G14740.1 21798944
AT2G35240.1 TraesCS5D01G387600.1 AT4G14740.1 21798944
AT2G35240.1 TraesCS1A01G177600.1 AT4G39050.1 21798944
AT2G35240.1 TraesCS1B01G202600.1 AT4G39050.1 21798944
AT2G35240.1 TraesCS1D01G176100.1 AT4G39050.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G457700.1 Wheat plastid 96.74 97.2
TraesCS2A01G437600.1 Wheat plastid 96.74 97.2
EES11377 Sorghum mitochondrion, plastid 91.16 90.74
Zm00001d026243_P002 Maize extracellular 88.84 88.02
GSMUA_Achr4P27580_001 Banana cytosol 60.0 87.76
GSMUA_Achr6P01260_001 Banana cytosol 60.0 87.76
CDX79529 Canola cytosol 48.37 85.95
CDY58181 Canola cytosol 56.28 72.02
TraesCS7D01G045100.1 Wheat mitochondrion, plastid 77.21 71.55
Bra017328.1-P Field mustard cytosol 60.47 69.89
Bra021852.1-P Field mustard plastid 71.16 68.92
CDY37719 Canola plastid 71.16 68.92
PGSC0003DMT400038117 Potato plastid 73.95 68.83
Solyc06g008220.2.1 Tomato plastid 75.81 68.2
VIT_05s0049g01500.t01 Wine grape plastid 73.49 67.81
CDY23734 Canola plastid 71.63 67.54
TraesCS6D01G007100.1 Wheat mitochondrion 75.35 67.22
CDY19491 Canola plastid 72.09 67.1
CDY17174 Canola plastid 71.16 66.52
Bra005495.1-P Field mustard plastid 71.16 66.52
KRH31686 Soybean mitochondrion 68.37 65.92
VIT_07s0005g03930.t01 Wine grape mitochondrion, plastid 71.63 65.25
KRG92352 Soybean mitochondrion, plastid 70.7 64.14
GSMUA_Achr2P17930_001 Banana mitochondrion, plastid 76.28 63.32
AT1G32580.1 Thale cress mitochondrion, plastid 66.51 62.45
CDX84224 Canola mitochondrion, plastid 65.12 60.87
PGSC0003DMT400060429 Potato plastid 66.05 60.68
Bra005357.1-P Field mustard plastid 65.12 59.83
CDY31675 Canola plastid 65.12 59.83
Solyc05g054960.2.1 Tomato plastid 65.12 59.83
AT2G35240.1 Thale cress mitochondrion, plastid 64.19 59.48
Bra036402.1-P Field mustard mitochondrion, plastid 60.93 58.74
KRH34443 Soybean plastid 71.63 58.33
CDY65831 Canola mitochondrion, plastid 60.0 57.85
Bra017613.1-P Field mustard plastid 18.14 57.35
HORVU1Hr1G057120.1 Barley plastid 40.47 56.86
Bra023005.1-P Field mustard endoplasmic reticulum 20.93 48.39
CDX79597 Canola plastid 50.7 46.78
CDX84615 Canola mitochondrion 31.16 37.43
TraesCS6D01G294000.1 Wheat mitochondrion 38.14 32.54
TraesCS7D01G303900.1 Wheat plastid 33.02 31.14
TraesCS5D01G298300.2 Wheat mitochondrion 39.07 20.9
TraesCS7D01G263300.1 Wheat mitochondrion 39.07 19.49
TraesCS4D01G104800.2 Wheat mitochondrion 33.95 17.55
Protein Annotations
EnsemblPlants:TraesCS2D01G434600.1EnsemblPlantsGene:TraesCS2D01G434600PANTHER:PTHR31346PANTHER:PTHR31346:SF9SEG:segMapMan:16.12.5.1
Description
No Description!
Coordinates
chr2D:-:545851540..545853530
Molecular Weight (calculated)
24221.9 Da
IEP (calculated)
9.207
GRAVY (calculated)
-0.713
Length
215 amino acids
Sequence
(BLAST)
001: MATAARAVAA AARPARPVLL SRRLPCPSGC PARRPRVGRA VRCMARRPDA SYSPLRPGQG GDRAPTEMAP LFPGCDYEHW LIVMDKPGGE GATKQQMIDC
101: YIQTLAKVVG SEEEAKKRIY NVSCERYFGF GCEIDEETSN KLEGLPGVLF VLPDSYVDAE NKDYGAELFV NGEIVQRSPE RQRRVEPVPQ RAQDRPRYSD
201: RTRYVKRREN QAYQR
Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
Arabidopsis Description
MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.