CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07517
KXG37970
KXG38192
OQU79534

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	EES07517	AT3G48150.1	21798944
AT2G35240.1	KXG37970	AT4G14740.1	21798944
AT2G35240.1	OQU79534	AT4G14740.1	21798944
AT2G35240.1	KXG38192	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026243_P002	Maize	extracellular	95.37	94.93
TraesCS2D01G434600.1	Wheat	plastid	90.74	91.16
TraesCS2A01G437600.1	Wheat	plastid	89.81	90.65
TraesCS2B01G457700.1	Wheat	plastid	89.35	90.19
GSMUA_Achr4P27580_001	Banana	cytosol	59.26	87.07
GSMUA_Achr6P01260_001	Banana	cytosol	59.26	87.07
CDX79529	Canola	cytosol	47.69	85.12
EER87743	Sorghum	mitochondrion	75.46	73.42
CDY58181	Canola	cytosol	55.56	71.43
PGSC0003DMT400038117	Potato	plastid	75.0	70.13
Bra017328.1-P	Field mustard	cytosol	60.19	69.89
Bra021852.1-P	Field mustard	plastid	71.3	69.37
CDY37719	Canola	plastid	71.3	69.37
CDY19491	Canola	plastid	74.07	69.26
CDY17174	Canola	plastid	73.61	69.13
Bra005495.1-P	Field mustard	plastid	73.61	69.13
CDY23734	Canola	plastid	72.69	68.86
Solyc06g008220.2.1	Tomato	plastid	75.93	68.62
VIT_05s0049g01500.t01	Wine grape	plastid	73.15	67.81
KRH31686	Soybean	mitochondrion	68.98	66.82
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	72.69	66.53
KRG92352	Soybean	mitochondrion, plastid	70.37	64.14
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	75.46	62.93
AT1G32580.1	Thale cress	mitochondrion, plastid	66.2	62.45
PGSC0003DMT400060429	Potato	plastid	66.2	61.11
Solyc05g054960.2.1	Tomato	plastid	65.28	60.26
CDX84224	Canola	mitochondrion, plastid	63.89	60.0
AT2G35240.1	Thale cress	mitochondrion, plastid	63.89	59.48
CDY31675	Canola	plastid	64.35	59.4
Bra005357.1-P	Field mustard	plastid	64.35	59.4
KRH34443	Soybean	plastid	71.3	58.33
CDY65831	Canola	mitochondrion, plastid	59.72	57.85
Bra036402.1-P	Field mustard	mitochondrion, plastid	59.72	57.85
Bra017613.1-P	Field mustard	plastid	18.06	57.35
HORVU1Hr1G057120.1	Barley	plastid	40.28	56.86
Bra023005.1-P	Field mustard	endoplasmic reticulum	20.83	48.39
CDX79597	Canola	plastid	50.46	46.78
CDX84615	Canola	mitochondrion	31.48	37.99
EES12861	Sorghum	mitochondrion	37.5	33.2
EES14516	Sorghum	plastid	32.87	31.56
EER92767	Sorghum	mitochondrion	37.04	23.05
EER92766	Sorghum	mitochondrion	38.89	21.65
OQU89756	Sorghum	plastid	32.87	16.59
EES08356	Sorghum	mitochondrion	32.87	15.85

Protein Annotations

EnsemblPlants:EES11377	EnsemblPlantsGene:SORBI_3006G204100	EntrezGene:8063924	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	ProteinID:EES11377	ProteinID:EES11377.1
RefSeq:XP_002447049.1	SEG:seg	unigene:Sbi.18395	UniParc:UPI00016FD8B9	UniProt:C5YF67	MapMan:16.12.5.1

Description

hypothetical protein

Coordinates

chr6:+:55445474..55448160

Molecular Weight (calculated)

24314.8 Da

IEP (calculated)

9.142

GRAVY (calculated)

-0.780

Length

216 amino acids

Sequence
(BLAST)

001: MATAARALVA ARPARPLLPS RRLPSSSSIR PPRQRGGGVG SVRCMARRPD SSYSPLRSGQ GGDRAPTEMA PLFPGCDYEH WLIVMDKPGG EGATKQQMID
101: CYIQTLAQVV GSEEEAKKRI YNVSCERYFG FGCEIDEETS NKLEGLPGVL FVLPDSYVDA ENKDYGAELF VNGEIVQRSP ERQRRVEPVP QRAQDRPRYS
201: DRTRYVKRRE NQSYQR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.