Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17174 | Canola | plastid | 95.67 | 96.09 |
| CDX79529 | Canola | cytosol | 49.35 | 94.21 |
| CDY23734 | Canola | plastid | 88.74 | 89.91 |
| CDY37719 | Canola | plastid | 86.15 | 89.64 |
| Os06t0116600-01 | Rice | mitochondrion | 61.04 | 85.45 |
| GSMUA_Achr6P01260_001 | Banana | cytosol | 54.11 | 85.03 |
| GSMUA_Achr4P27580_001 | Banana | cytosol | 54.11 | 85.03 |
| HORVU0Hr1G032330.2 | Barley | cytosol | 39.83 | 84.4 |
| EES11377 | Sorghum | mitochondrion, plastid | 69.26 | 74.07 |
| CDY58181 | Canola | cytosol | 53.68 | 73.81 |
| Zm00001d026243_P002 | Maize | extracellular | 67.97 | 72.35 |
| TraesCS2D01G434600.1 | Wheat | plastid | 67.1 | 72.09 |
| TraesCS2B01G457700.1 | Wheat | plastid | 66.23 | 71.5 |
| TraesCS2A01G437600.1 | Wheat | plastid | 65.8 | 71.03 |
| KRG92352 | Soybean | mitochondrion, plastid | 71.86 | 70.04 |
| KRH31686 | Soybean | mitochondrion | 67.1 | 69.51 |
| VIT_07s0005g03930.t01 | Wine grape | mitochondrion, plastid | 70.56 | 69.07 |
| Zm00001d045528_P001 | Maize | mitochondrion | 65.37 | 67.71 |
| TraesCS4A01G437100.1 | Wheat | mitochondrion | 67.53 | 66.38 |
| TraesCS7D01G045100.1 | Wheat | mitochondrion, plastid | 66.67 | 66.38 |
| EER87743 | Sorghum | mitochondrion | 63.64 | 66.22 |
| TraesCS7A01G050200.1 | Wheat | mitochondrion | 67.53 | 66.1 |
| CDX84224 | Canola | mitochondrion, plastid | 65.8 | 66.09 |
| HORVU7Hr1G008880.2 | Barley | plastid | 67.53 | 65.0 |
| CDY31675 | Canola | plastid | 65.8 | 64.96 |
| GSMUA_Achr2P17930_001 | Banana | mitochondrion, plastid | 71.43 | 63.71 |
| CDY65831 | Canola | mitochondrion, plastid | 61.47 | 63.68 |
| KRH34443 | Soybean | plastid | 72.73 | 63.64 |
| PGSC0003DMT400060429 | Potato | plastid | 64.07 | 63.25 |
| Solyc05g054960.2.1 | Tomato | plastid | 63.2 | 62.39 |
| TraesCS6D01G007100.1 | Wheat | mitochondrion | 63.2 | 60.58 |
| HORVU5Hr1G072150.9 | Barley | mitochondrion | 44.16 | 59.3 |
| TraesCS6B01G010000.1 | Wheat | plastid | 64.07 | 58.96 |
| TraesCS6A01G005300.1 | Wheat | plastid | 63.64 | 58.8 |
| HORVU6Hr1G002030.1 | Barley | plastid | 64.07 | 57.59 |
| HORVU1Hr1G057120.1 | Barley | plastid | 33.77 | 50.98 |
| CDX79597 | Canola | plastid | 51.08 | 50.64 |
| CDX84615 | Canola | mitochondrion | 33.77 | 43.58 |
| TraesCS3A01G476100.2 | Wheat | plastid | 32.47 | 42.13 |
| CDX97960 | Canola | cytosol | 27.71 | 41.56 |
| CDY20996 | Canola | cytosol | 27.27 | 41.18 |
| CDX74079 | Canola | cytosol | 25.54 | 40.14 |
| CDY34929 | Canola | cytosol | 23.81 | 39.29 |
| CDY08033 | Canola | mitochondrion | 36.36 | 39.07 |
| HORVU2Hr1G040170.17 | Barley | mitochondrion | 42.86 | 36.26 |
| CDY49781 | Canola | plastid | 32.9 | 31.67 |
| CDY37239 | Canola | cytosol | 17.75 | 31.3 |
| CDX72924 | Canola | mitochondrion | 23.81 | 30.05 |
| CDX68262 | Canola | mitochondrion | 24.68 | 30.0 |
| CDX96416 | Canola | mitochondrion | 23.38 | 28.42 |
| CDY65020 | Canola | mitochondrion | 22.94 | 27.89 |
| CDY57037 | Canola | mitochondrion | 31.17 | 27.8 |
| CDY20096 | Canola | plastid | 32.03 | 23.57 |
| CDX97626 | Canola | plastid | 36.8 | 23.35 |
| CDX98522 | Canola | plastid | 36.8 | 22.91 |
| CDX82454 | Canola | mitochondrion, plastid | 36.8 | 21.85 |
| CDX98651 | Canola | mitochondrion | 30.3 | 21.67 |
| CDX75801 | Canola | mitochondrion, plastid | 36.36 | 21.05 |
| CDX78969 | Canola | mitochondrion | 30.74 | 18.54 |
| CDY50054 | Canola | mitochondrion | 29.87 | 18.16 |
| CDY01629 | Canola | mitochondrion | 29.44 | 17.3 |
| CDY32326 | Canola | cytosol | 26.41 | 17.28 |
| CDY60655 | Canola | plastid | 24.68 | 7.89 |
Protein Annotations
| EnsemblPlants:CDY19491 | EnsemblPlantsGene:GSBRNA2T00009093001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF9 | ProteinID:CDY19491 | ProteinID:CDY19491.1 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI0004EDD6D6 | UniProt:A0A078G2G6 | MapMan:16.12.5.1 | : | : |
Description
BnaC04g11080DBnaC04g11080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2G6]
Coordinates
chrLK032096:+:659761..661654
Molecular Weight (calculated)
25752.4 Da
IEP (calculated)
7.150
GRAVY (calculated)
-0.545
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSLPISGT RHLTLLPLLS SSILVAPPQT SSSVNCSGFS SGCDVIGSRL ACSTRFVSIR CRANRSGSAY SPLNSGSNFS DRPPTEMAPL FPGCDYEHWL
101: IVMDKPGGEG ATKQEMIDCY IQTLAKVVGS EEEAKKRIYN VSCERYLGFG CEIDEETSTK LEGLPGVLFV LPDSYVDPEN KDYGAELFVN GEIVQRSPER
201: QRRVEPQPQR AQDRPRYNDR TRYSRRRENT R
101: IVMDKPGGEG ATKQEMIDCY IQTLAKVVGS EEEAKKRIYN VSCERYLGFG CEIDEETSTK LEGLPGVLFV LPDSYVDPEN KDYGAELFVN GEIVQRSPER
201: QRRVEPQPQR AQDRPRYNDR TRYSRRRENT R
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
Arabidopsis Description
MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.