CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013439.1-P	Field mustard	mitochondrion	97.13	96.62
CDY50054	Canola	mitochondrion	95.56	96.32
CDY01629	Canola	mitochondrion	81.2	79.13
CDX98651	Canola	mitochondrion	65.8	78.02
AT4G20020.1	Thale cress	mitochondrion	77.02	70.41
CDY20996	Canola	cytosol	19.58	49.02
CDX97960	Canola	cytosol	19.58	48.7
VIT_12s0035g00240.t01	Wine grape	mitochondrion	45.17	42.93
CDY34929	Canola	cytosol	15.14	41.43
CDY37239	Canola	cytosol	13.84	40.46
CDX74079	Canola	cytosol	15.4	40.14
CDY58181	Canola	cytosol	16.19	36.9
CDX79529	Canola	cytosol	11.49	36.36
CDY49781	Canola	plastid	22.72	36.25
Os11t0216400-01	Rice	mitochondrion	33.68	34.49
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	38.12	33.95
CDY08033	Canola	mitochondrion	19.06	33.95
TraesCS4D01G104800.2	Wheat	mitochondrion	36.81	33.89
GSMUA_Achr1P22060_001	Banana	mitochondrion	34.2	33.59
Zm00001d049043_P001	Maize	mitochondrion	35.77	33.41
TraesCS4A01G203900.1	Wheat	nucleus	36.03	33.33
CDY57037	Canola	mitochondrion	22.19	32.82
TraesCS4B01G107700.2	Wheat	mitochondrion	37.08	32.79
CDY65831	Canola	mitochondrion, plastid	19.06	32.74
KRH44085	Soybean	mitochondrion, plastid	38.9	32.25
KRH26355	Soybean	mitochondrion	38.38	31.82
CDY17174	Canola	plastid	19.06	31.74
CDY37719	Canola	plastid	18.02	31.08
PGSC0003DMT400057561	Potato	mitochondrion, plastid	38.12	31.06
Solyc02g079210.2.1	Tomato	plastid	37.08	30.87
CDY19491	Canola	plastid	18.54	30.74
CDY23734	Canola	plastid	18.28	30.7
EES08356	Sorghum	mitochondrion	35.77	30.58
CDY31675	Canola	plastid	18.28	29.91
CDX84224	Canola	mitochondrion, plastid	17.75	29.57
CDX79597	Canola	plastid	17.75	29.18
CDX72924	Canola	mitochondrion	12.79	26.78
CDX96416	Canola	mitochondrion	13.05	26.32
CDY60655	Canola	plastid	49.09	26.04
CDX97626	Canola	plastid	24.54	25.82
CDY20096	Canola	plastid	21.15	25.8
CDY65020	Canola	mitochondrion	12.53	25.26
CDX84615	Canola	mitochondrion	11.75	25.14
CDX98522	Canola	plastid	24.28	25.07
CDX68262	Canola	mitochondrion	12.27	24.74
CDX82454	Canola	mitochondrion, plastid	24.8	24.42
CDX75801	Canola	mitochondrion, plastid	24.8	23.81
CDY32326	Canola	cytosol	20.63	22.38

Protein Annotations

EnsemblPlants:CDX78969	EnsemblPlantsGene:GSBRNA2T00131478001	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:CDX78969	ProteinID:CDX78969.1
SEG:seg	UniParc:UPI0004EDBA52	MapMan:16.12.5.1	:	:	:

Description

BnaA01g10360D

Coordinates

chrLK031816:-:1133650..1135665

Molecular Weight (calculated)

41031.4 Da

IEP (calculated)

8.147

GRAVY (calculated)

-0.945

Length

383 amino acids

Sequence
(BLAST)

001: MAMYSHRLRR ALLTTTSCLN RSITLSPSSS VAPTSVTPSV STVLQRSVLG RFTGASRAPV RLFSTRQYKL YKEGDEITEN TVLFEGCDYN HWLITMDFPK
101: DSPLSPEEMV STYEKTCAAG LGISLEEAKK KIYACSTTTY QGFQAIMSEE ESEKFKDLPG VVFILPDSYI DPANKEYGGD KYENGVITHR PPPFQPNRRQ
201: PRDKFNQRPD RQGSPQNFQR NPQYGQQPPM QGGGGGGYGG PQQSYGPPGQ APPPPFPGGY NQGPPRSPPP PYQGGYNQGQ GSPVPPYQGP PGGYGQGGPG
301: NFNQGPQGGY NQGGPRNYGP QGGGNYGPAP GAGAPNPGFG QGYGGPGQEQ NQTFPQGDQR NVAGDWNNNN PAGQPGPDQV SCA

Best Arabidopsis Sequence Match ( AT4G20020.1 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQV
401: RSRSIMNLAS FFFDILIRH

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.