Factsheet for HORVU4Hr1G016440.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G104800.2	Wheat	mitochondrion	90.7	93.75
TraesCS4A01G203900.1	Wheat	nucleus	88.84	92.27
TraesCS4B01G107700.2	Wheat	mitochondrion	92.09	91.45
Zm00001d049043_P001	Maize	mitochondrion	71.86	75.37
Os11t0216400-01	Rice	mitochondrion	64.65	74.33
EES08356	Sorghum	mitochondrion	75.35	72.32
GSMUA_Achr1P22060_001	Banana	mitochondrion	47.91	52.82
VIT_12s0035g00240.t01	Wine grape	mitochondrion	40.7	43.42
HORVU7Hr1G073170.2	Barley	plastid	22.56	38.34
CDX78969	Canola	mitochondrion	33.95	38.12
Bra013439.1-P	Field mustard	mitochondrion	33.95	37.92
CDY50054	Canola	mitochondrion	33.49	37.89
CDX98651	Canola	mitochondrion	27.91	37.15
HORVU0Hr1G032330.2	Barley	cytosol	9.3	36.7
Bra012522.1-P	Field mustard	mitochondrion, plastid	33.02	36.6
CDY01629	Canola	mitochondrion	33.02	36.13
HORVU5Hr1G072150.9	Barley	mitochondrion	13.72	34.3
Solyc02g079210.2.1	Tomato	plastid	36.51	34.13
AT4G20020.1	Thale cress	mitochondrion	32.79	33.65
PGSC0003DMT400057561	Potato	mitochondrion, plastid	36.74	33.62
HORVU7Hr1G008880.2	Barley	plastid	17.91	32.08
KRH44085	Soybean	mitochondrion, plastid	34.42	32.03
KRH26355	Soybean	mitochondrion	34.19	31.82
HORVU1Hr1G057120.1	Barley	plastid	11.16	31.37
HORVU6Hr1G002030.1	Barley	plastid	18.6	31.13
HORVU6Hr1G077460.3	Barley	plastid	16.98	27.55
HORVU5Hr1G077020.3	Barley	mitochondrion	22.56	23.83
HORVU2Hr1G040170.17	Barley	mitochondrion	14.19	22.34
HORVU7Hr1G054850.2	Barley	plastid	21.63	21.48
CDY60655	Canola	plastid	32.79	19.53
AT5G44780.1	Thale cress	mitochondrion	32.56	19.36
Bra025105.1-P	Field mustard	mitochondrion	32.33	18.96

Protein Annotations

EMBL:AK356074	EMBL:AK356289	EMBL:AK356320	EnsemblPlants:HORVU4Hr1G016440.1	EnsemblPlantsGene:HORVU4Hr1G016440	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5
SEG:seg	UniParc:UPI0002004AB2	UniProt:F2CWS1	MapMan:16.12.5.1	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CWS1]

Coordinates

chrchr4H:+:67512572..67517399

Molecular Weight (calculated)

45667.3 Da

IEP (calculated)

8.832

GRAVY (calculated)

-0.971

Length

430 amino acids

Sequence
(BLAST)

001: MALALRLRRA LAAASTSASL LRPTASAAAS PHRSPLLAPF AAPLPRPFLP GGAAGFRSTA AAAARGNYGG GADEAKIDPD EILFEGCDYN HWLITMEFPD
101: PKPSREEMIE TYLQTLAKVV GSYEEAKKRM YALSTTTYVG FQAVMTEEMS EKFRGLPGVV FILPDSYLYP ETKEYGGDKY ENGVITPRPP PVQYSKPSRT
201: DRNRNYRGNY ENSPPSQGNY QNSAPPQGNY QNSSPPQGNF QAYRPQQDVR GHAPQQNYTQ AGQDGRGYGR NDSADRSGYN APGGYQGRVN EAGQGFQNPQ
301: ERRSFSQGQA GDLRPGGPSA PGNYGQPPAP GNYGQPPAPG NYGQPPAPGN YGQPPAPGNY GQPPAPGSYG KPAYGQPSGS RYPGGNLGGP AYGGDNRQGA
401: APAYGGDNSQ GASDQYPGPG EGQGNWQGRQ

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.