CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025105.1-P	Field mustard	mitochondrion	85.87	84.58
AT5G44780.1	Thale cress	mitochondrion	63.3	63.21
CDX78969	Canola	mitochondrion	26.04	49.09
CDY50054	Canola	mitochondrion	25.62	48.68
CDX98651	Canola	mitochondrion	21.33	47.68
CDY01629	Canola	mitochondrion	24.52	45.04
CDX97960	Canola	cytosol	9.56	44.81
CDY20996	Canola	cytosol	9.42	44.44
VIT_12s0035g00240.t01	Wine grape	mitochondrion	20.78	37.22
CDY34929	Canola	cytosol	7.06	36.43
CDY37239	Canola	cytosol	6.51	35.88
TraesCS4D01G104800.2	Wheat	mitochondrion	19.39	33.65
CDX74079	Canola	cytosol	6.79	33.33
TraesCS4A01G203900.1	Wheat	nucleus	18.98	33.09
KRH26355	Soybean	mitochondrion	21.05	32.9
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	19.53	32.79
Zm00001d049043_P001	Maize	mitochondrion	18.56	32.68
Os11t0216400-01	Rice	mitochondrion	16.9	32.62
GSMUA_Achr1P22060_001	Banana	mitochondrion	17.59	32.56
KRH44085	Soybean	mitochondrion, plastid	20.78	32.47
TraesCS4B01G107700.2	Wheat	mitochondrion	19.25	32.1
CDX79529	Canola	cytosol	5.26	31.41
CDY49781	Canola	plastid	10.25	30.83
Solyc02g079210.2.1	Tomato	plastid	19.11	30.0
EES08356	Sorghum	mitochondrion	18.56	29.91
CDY58181	Canola	cytosol	6.93	29.76
PGSC0003DMT400057561	Potato	mitochondrion, plastid	19.25	29.57
CDY57037	Canola	mitochondrion	10.53	29.34
CDY08033	Canola	mitochondrion	8.59	28.84
CDX72924	Canola	mitochondrion	7.06	27.87
CDY65831	Canola	mitochondrion, plastid	8.59	27.8
CDX84224	Canola	mitochondrion, plastid	8.45	26.52
CDY23734	Canola	plastid	8.31	26.32
CDY37719	Canola	plastid	8.03	26.13
CDY31675	Canola	plastid	8.45	26.07
CDY20096	Canola	plastid	11.22	25.8
CDX96416	Canola	mitochondrion	6.79	25.79
CDY65020	Canola	mitochondrion	6.65	25.26
CDX79597	Canola	plastid	8.03	24.89
CDY17174	Canola	plastid	7.89	24.78
CDX68262	Canola	mitochondrion	6.51	24.74
CDY19491	Canola	plastid	7.89	24.68
CDX97626	Canola	plastid	11.77	23.35
CDX98522	Canola	plastid	11.77	22.91
CDX82454	Canola	mitochondrion, plastid	12.33	22.88
CDX84615	Canola	mitochondrion	5.4	21.79
CDX75801	Canola	mitochondrion, plastid	11.91	21.55
CDY32326	Canola	cytosol	10.39	21.25

Protein Annotations

EnsemblPlants:CDY60655	EnsemblPlantsGene:GSBRNA2T00029893001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016554
GO:GO:0080156	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:CDY60655	ProteinID:CDY60655.1	SEG:seg
UniParc:UPI0004EF417B	UniProt:A0A078J3V2	MapMan:16.12.5.1	:	:	:

Description

BnaCnng36780DMultiple organellar RNA editing factor 4, mitochondrial [Source:Projected from Arabidopsis thaliana (AT5G44780) UniProtKB/Swiss-Prot;Acc:O48582]

Coordinates

chrLK033902:+:26059..29746

Molecular Weight (calculated)

78460.9 Da

IEP (calculated)

7.581

GRAVY (calculated)

-1.006

Length

722 amino acids

Sequence
(BLAST)

001: MHTCRGKSPA SMAAMLSHRL RRVLLALPSS FQRPFTPARV SHFPPVSPLL RQTLVKQPTE FTQSPARLFS TTQYQYDPYT GEDSFTPDNE GCDFNHWLIT
101: MDFPKENPPS REEMISIFEQ TCAKGLGLSL EEAKKKIYAI CTTSYQGFQA TMSIGEVEKF RDLPGVQYII PDSYVDVGNK VYGGDKYEDG VITPGPVPVP
201: TKEGFDSLEK ESASEEGKTQ EAQTQPVQEL TSGQVLGQGS QTPPEQILFK QDQGTLAPIQ GQDQGSRMPP EQERSFKQNQ GPLTPIQWRP TPRQWKGRGE
301: VSTSRQGPSF QWNFNRDQGN PTLGQRQVQG NQIPSFQGSF KQGQGTPFVG QVQSQESQMP SSQRSYNQGQ GTPIYAQEQG KGQGSQTSFN HMGYSQGQGA
401: QAPPYQGSPS SYSQGAVVNY NQGPPQGNLT QGTHENYNQI GRGNNTPQSG GNYGPSQGAG SPGYGHGQGQ GGGQLLSPYQ GSYNQGQGNP MPGQAQGGQI
501: PSYRIGYSPG QGAPVPPYQV NYNQGTPGNN GQWAFVNYNQ GPPHGNFLQG PHQNYNQGAQ WNFSPPNGGN YGPPQFGNQM PQYQWSYNQG QGAPFPGQWQ
601: CPGCGMPLYQ GTYYQSQGTP NHGQWQGQGF AMPSYQARTP TSSGQGTSAN FNQGSPVKYI QTGEGNYNLQ SGGSYGPTHG SAGFSGQGQN QTFPQKDQRN
701: VVGDWSNNNN PKDPTETGKV SS

Best Arabidopsis Sequence Match ( AT5G44780.1 )
(BLAST)

001: MAMFSHRLRR IVVAAPSYFQ RFSTLSRPSD FTPVPSLLPR SVVKQSTAIN RSPARLFSTT QYQYDPYTGE DSFMPDNEGC DFNHWLITMN FPKDNLPSRE
101: EMISIFEQTC AKGLAISLEE AKKKIYAICT TSYQGFQATM TIGEVEKFRD LPGVQYIIPD SYIDVENKVY GGDKYENGVI TPGPVPVPTK EGFDSLKKES
201: KPEQEEAEII LTPPDEGKTS GQVQGQGSLT LPDQRSVKER QGTLALVQGQ GQRSGMSILG QGQGEGRRMS IPGQWQSRGQ GNSFQGSFKQ SQGTLPVRKG
301: QTQISDEIPS FQGNVKQRQE MPIHGQGQAQ RSQMPSSQGT LRQGQAQGSQ RPSNQVGYNQ GQGAQTPPYH QGQGAQTPPY QESPNNYGQG AFVQYNQGPP
401: QGNVVQTTQE KYNQMGQGNY APQSGGNYSP AQGAGSPRFG YGQGQGGQLL SPYRGNYNQG QGTPLPGQGQ EGQPSYQMGF SQGLGAPVPP NQVIPGNYGQ
501: WAFVNYNQGP PQGNFLQGPQ QNHNQGGQWN YSPQNGGHYG PAQFGQWYPG PPQGQGIQWP QYQLSYNQGQ GTPFSGQCRC PNCGMTSYQG YNNQGQGTHI
601: PEQWEGQDYA VLSYQASYNQ AHGAQAPPYH GNYNQATPGG YGQGTSANFN QRFPVNPANY NMQNGGNYGP PHGLAGNPGF RQGFSGQGQN QTFQQDDQRN
701: VAGDLRNNNP VDPTETRKPN SRI

Arabidopsis Description

MORF4Multiple organellar RNA editing factor 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48582]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.