CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79529	Canola	cytosol	50.88	95.87
CDY37719	Canola	plastid	90.35	92.79
CDY19491	Canola	plastid	89.91	88.74
CDY17174	Canola	plastid	88.6	87.83
GSMUA_Achr4P27580_001	Banana	cytosol	55.26	85.71
GSMUA_Achr6P01260_001	Banana	cytosol	55.26	85.71
Os06t0116600-01	Rice	mitochondrion	61.84	85.45
HORVU0Hr1G032330.2	Barley	cytosol	40.35	84.4
CDY58181	Canola	cytosol	54.82	74.4
EES11377	Sorghum	mitochondrion, plastid	68.86	72.69
TraesCS2D01G434600.1	Wheat	plastid	67.54	71.63
Zm00001d026243_P002	Maize	extracellular	67.98	71.43
TraesCS2A01G437600.1	Wheat	plastid	66.67	71.03
TraesCS2B01G457700.1	Wheat	plastid	66.67	71.03
KRG92352	Soybean	mitochondrion, plastid	72.81	70.04
KRH31686	Soybean	mitochondrion	67.98	69.51
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	70.18	67.8
Zm00001d045528_P001	Maize	mitochondrion	65.79	67.26
CDX84224	Canola	mitochondrion, plastid	67.11	66.52
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	67.11	65.95
CDY31675	Canola	plastid	67.54	65.81
EER87743	Sorghum	mitochondrion	64.04	65.77
TraesCS4A01G437100.1	Wheat	mitochondrion	67.54	65.53
TraesCS7A01G050200.1	Wheat	mitochondrion	66.67	64.41
HORVU7Hr1G008880.2	Barley	plastid	67.54	64.17
CDY65831	Canola	mitochondrion, plastid	62.72	64.13
KRH34443	Soybean	plastid	74.12	64.02
PGSC0003DMT400060429	Potato	plastid	64.91	63.25
Solyc05g054960.2.1	Tomato	plastid	64.47	62.82
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	70.61	62.16
TraesCS6D01G007100.1	Wheat	mitochondrion	64.91	61.41
TraesCS6A01G005300.1	Wheat	plastid	65.79	60.0
TraesCS6B01G010000.1	Wheat	plastid	65.35	59.36
HORVU5Hr1G072150.9	Barley	mitochondrion	44.74	59.3
HORVU6Hr1G002030.1	Barley	plastid	65.35	57.98
CDX79597	Canola	plastid	52.19	51.07
HORVU1Hr1G057120.1	Barley	plastid	33.77	50.33
TraesCS3A01G476100.2	Wheat	plastid	35.53	45.51
CDX84615	Canola	mitochondrion	34.21	43.58
CDX97960	Canola	cytosol	28.07	41.56
CDY20996	Canola	cytosol	27.63	41.18
CDX74079	Canola	cytosol	26.32	40.82
CDY34929	Canola	cytosol	24.56	40.0
CDY08033	Canola	mitochondrion	36.84	39.07
HORVU2Hr1G040170.17	Barley	mitochondrion	43.42	36.26
CDY37239	Canola	cytosol	17.98	31.3
CDY49781	Canola	plastid	32.89	31.25
CDX72924	Canola	mitochondrion	25.0	31.15
CDX68262	Canola	mitochondrion	25.0	30.0
CDX96416	Canola	mitochondrion	24.12	28.95
CDY65020	Canola	mitochondrion	23.25	27.89
CDY57037	Canola	mitochondrion	31.14	27.41
CDY20096	Canola	plastid	32.02	23.25
CDX97626	Canola	plastid	35.96	22.53
CDX98522	Canola	plastid	35.96	22.1
CDX82454	Canola	mitochondrion, plastid	35.96	21.08
CDX98651	Canola	mitochondrion	29.82	21.05
CDX75801	Canola	mitochondrion, plastid	35.53	20.3
CDX78969	Canola	mitochondrion	30.7	18.28
CDY50054	Canola	mitochondrion	30.26	18.16
CDY01629	Canola	mitochondrion	29.39	17.05
CDY32326	Canola	cytosol	26.32	17.0
CDY60655	Canola	plastid	26.32	8.31

Protein Annotations

EnsemblPlants:CDY23734	EnsemblPlantsGene:GSBRNA2T00024063001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	ProteinID:CDY23734	ProteinID:CDY23734.1	SEG:seg
UniParc:UPI0004EB16CC	UniProt:A0A078GEH7	MapMan:16.12.5.1	:	:	:

Description

BnaC04g43880DBnaC04g43880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEH7]

Coordinates

chrLK032148:-:87072..88934

Molecular Weight (calculated)

25564.1 Da

IEP (calculated)

8.349

GRAVY (calculated)

-0.714

Length

228 amino acids

Sequence
(BLAST)

001: MALPISGTRH LTRSLFPSTT LVSPPKLPST VRCGGFSSGR DSVGSRLPSS TRFTSIRCLA NRSGSAYSPL NSGSNFSDRP PTEMAPLFPG CDYEHWLIVM
101: DKPGGEGATK QEMIDCYVQT LAKVVGSEEE AKKRIYNVSC ERYLGFGCEI DEETSTKLEG LPGVLFVLPD SYVDPENKDY GAELFVNGEI VQRSPERQRR
201: VEPQPQRAQD RPRYNDRTRY SRRRENTR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.