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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS5A01G056700.2
TraesCS5A01G377600.1
TraesCS5B01G060100.2
TraesCS5B01G381200.1
TraesCS5D01G067900.2
TraesCS5D01G387600.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G32580.1 TraesCS6A01G251400.1 AT3G48150.1 21798944
AT1G32580.1 TraesCS6B01G273900.1 AT3G48150.1 21798944
AT1G32580.1 TraesCS6D01G233200.1 AT3G48150.1 21798944
AT2G35240.1 TraesCS5A01G056700.2 AT4G14740.1 21798944
AT2G35240.1 TraesCS5A01G377600.1 AT4G14740.1 21798944
AT2G35240.1 TraesCS5B01G060100.2 AT4G14740.1 21798944
AT2G35240.1 TraesCS5B01G381200.1 AT4G14740.1 21798944
AT2G35240.1 TraesCS5D01G067900.2 AT4G14740.1 21798944
AT2G35240.1 TraesCS5D01G387600.1 AT4G14740.1 21798944
AT2G35240.1 TraesCS1A01G177600.1 AT4G39050.1 21798944
AT2G35240.1 TraesCS1B01G202600.1 AT4G39050.1 21798944
AT2G35240.1 TraesCS1D01G176100.1 AT4G39050.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G032330.2 Barley cytosol 42.23 97.25
Os06t0116600-01 Rice mitochondrion 60.56 92.12
TraesCS6D01G007100.1 Wheat mitochondrion 88.05 91.7
TraesCS6A01G005300.1 Wheat plastid 91.24 91.6
HORVU6Hr1G002030.1 Barley plastid 88.84 86.77
GSMUA_Achr6P01260_001 Banana cytosol 49.8 85.03
GSMUA_Achr4P27580_001 Banana cytosol 49.0 83.67
CDX79529 Canola cytosol 39.04 80.99
EER87743 Sorghum mitochondrion 71.31 80.63
Zm00001d045528_P001 Maize mitochondrion 70.12 78.92
CDY58181 Canola cytosol 49.8 74.4
TraesCS2B01G457700.1 Wheat plastid 63.35 74.3
Bra017328.1-P Field mustard cytosol 53.39 72.04
KRH31686 Soybean mitochondrion 58.96 66.37
VIT_05s0049g01500.t01 Wine grape plastid 60.96 65.67
PGSC0003DMT400038117 Potato plastid 60.16 65.37
CDY23734 Canola plastid 59.36 65.35
CDY37719 Canola plastid 57.37 64.86
Bra021852.1-P Field mustard plastid 57.37 64.86
Bra005495.1-P Field mustard plastid 59.36 64.78
Bra017613.1-P Field mustard plastid 17.53 64.71
Solyc06g008220.2.1 Tomato plastid 61.35 64.44
VIT_07s0005g03930.t01 Wine grape mitochondrion, plastid 60.56 64.41
CDY19491 Canola plastid 58.96 64.07
CDY17174 Canola plastid 58.57 63.91
KRG92352 Soybean mitochondrion, plastid 59.76 63.29
CDX84224 Canola mitochondrion, plastid 57.77 63.04
PGSC0003DMT400060429 Potato plastid 58.57 62.82
Bra005357.1-P Field mustard plastid 57.77 61.97
Solyc05g054960.2.1 Tomato plastid 57.77 61.97
CDY31675 Canola plastid 57.77 61.97
AT1G32580.1 Thale cress mitochondrion, plastid 55.78 61.14
Bra036402.1-P Field mustard mitochondrion, plastid 54.18 60.99
CDY65831 Canola mitochondrion, plastid 53.78 60.54
GSMUA_Achr2P17930_001 Banana mitochondrion, plastid 62.15 60.23
AT2G35240.1 Thale cress mitochondrion, plastid 53.78 58.19
KRH34443 Soybean plastid 60.16 57.2
CDX79597 Canola plastid 47.01 50.64
Bra023005.1-P Field mustard endoplasmic reticulum 17.93 48.39
CDX84615 Canola mitochondrion 29.88 41.9
TraesCS6B01G344700.2 Wheat mitochondrion 35.06 34.78
TraesCS7B01G207300.1 Wheat plastid 28.69 31.58
TraesCS5B01G290000.1 Wheat mitochondrion, plastid 30.28 22.55
TraesCS5B01G289900.1 Wheat nucleus 32.27 20.1
TraesCS7B01G160200.1 Wheat mitochondrion 33.07 19.95
TraesCS4B01G107700.2 Wheat mitochondrion 31.08 18.01
Protein Annotations
EnsemblPlants:TraesCS6B01G010000.1EnsemblPlantsGene:TraesCS6B01G010000PANTHER:PTHR31346PANTHER:PTHR31346:SF9SEG:segMapMan:16.12.5.1
Description
No Description!
Coordinates
chr6B:-:6166412..6168904
Molecular Weight (calculated)
27388.5 Da
IEP (calculated)
9.325
GRAVY (calculated)
-0.574
Length
251 amino acids
Sequence
(BLAST)
001: MAAAAAASMA RRLLSPTTTS YSTAARLLIS RRLASAPIIP RAPAAAMELL RPAAVASSSS SLLLRSVGGA RGMARRPGGG DGYSPARGGG GGGGDRAPTE
101: MAPLFPGCDY EHWLIVMDKP GGEGASKHQM VDCYVHTLAK VLGSEEEAKR KIYNVSCERY FGFGCEIDEE TSNKLEGIPG VLFVLPDSYV DPEHKDYGAE
201: LFVNGEIVQR PPERQRRVEP VPQRASDRPR YNDRTRYARR RENQQQQQPQ R
Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
Arabidopsis Description
MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.