Factsheet for GSMUA_Achr4P27580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr4P21160_001
GSMUA_Achr4P21170_001
GSMUA_Achr5P02990_001
GSMUA_Achr7P07730_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	GSMUA_Achr11P...	AT3G48150.1	21798944
AT2G35240.1	GSMUA_Achr4P21160_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr4P21170_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr5P02990_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr7P07730_001	AT4G14740.1	21798944
AT2G35240.1	GSMUA_AchrUn_...	AT4G14740.1	21798944
AT2G35240.1	GSMUA_Achr11P...	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01260_001	Banana	cytosol	96.6	96.6
CDX79529	Canola	cytosol	66.67	80.99
HORVU0Hr1G032330.2	Barley	cytosol	58.5	78.9
Os06t0116600-01	Rice	mitochondrion	87.07	77.58
CDY58181	Canola	cytosol	78.23	68.45
Bra017328.1-P	Field mustard	cytosol	82.31	65.05
TraesCS2D01G434600.1	Wheat	plastid	87.76	60.0
TraesCS2B01G457700.1	Wheat	plastid	87.07	59.81
TraesCS2A01G437600.1	Wheat	plastid	86.39	59.35
EES11377	Sorghum	mitochondrion, plastid	87.07	59.26
Zm00001d026243_P002	Maize	extracellular	87.07	58.99
Zm00001d045528_P001	Maize	mitochondrion	87.07	57.4
Bra017613.1-P	Field mustard	plastid	26.53	57.35
EER87743	Sorghum	mitochondrion	86.39	57.21
Bra021852.1-P	Field mustard	plastid	85.03	56.31
CDY37719	Canola	plastid	85.03	56.31
PGSC0003DMT400038117	Potato	plastid	87.76	55.84
AT1G32580.1	Thale cress	mitochondrion, plastid	86.39	55.46
CDY23734	Canola	plastid	85.71	55.26
VIT_05s0049g01500.t01	Wine grape	plastid	87.07	54.94
KRH31686	Soybean	mitochondrion	82.99	54.71
Bra005495.1-P	Field mustard	plastid	85.03	54.35
CDY17174	Canola	plastid	85.03	54.35
CDY19491	Canola	plastid	85.03	54.11
HORVU5Hr1G072150.9	Barley	mitochondrion	63.27	54.07
Solyc06g008220.2.1	Tomato	plastid	87.76	53.97
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	85.03	53.88
Bra036402.1-P	Field mustard	mitochondrion, plastid	81.63	53.81
CDX84224	Canola	mitochondrion, plastid	83.67	53.48
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	85.71	53.39
CDY65831	Canola	mitochondrion, plastid	80.95	53.36
TraesCS4A01G437100.1	Wheat	mitochondrion	85.03	53.19
Bra005357.1-P	Field mustard	plastid	83.67	52.56
CDY31675	Canola	plastid	83.67	52.56
TraesCS7A01G050200.1	Wheat	mitochondrion	84.35	52.54
KRG92352	Soybean	mitochondrion, plastid	84.35	52.32
AT2G35240.1	Thale cress	mitochondrion, plastid	82.31	52.16
HORVU7Hr1G008880.2	Barley	plastid	85.03	52.08
PGSC0003DMT400060429	Potato	plastid	81.63	51.28
Solyc05g054960.2.1	Tomato	plastid	80.95	50.85
TraesCS6D01G007100.1	Wheat	mitochondrion	82.99	50.62
TraesCS6A01G005300.1	Wheat	plastid	83.67	49.2
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	86.39	49.03
TraesCS6B01G010000.1	Wheat	plastid	83.67	49.0
HORVU6Hr1G002030.1	Barley	plastid	84.35	48.25
KRH34443	Soybean	plastid	85.71	47.73
Bra023005.1-P	Field mustard	endoplasmic reticulum	29.93	47.31
CDX79597	Canola	plastid	68.71	43.35
HORVU1Hr1G057120.1	Barley	plastid	40.14	38.56
GSMUA_Achr8P33150_001	Banana	cytosol	34.69	36.69
TraesCS3A01G476100.2	Wheat	plastid	43.54	35.96
HORVU2Hr1G040170.17	Barley	mitochondrion	60.54	32.6
CDX84615	Canola	mitochondrion	39.46	32.4
GSMUA_Achr11P...	Banana	mitochondrion	51.02	29.64
GSMUA_Achr8P22480_001	Banana	mitochondrion	51.02	28.96
GSMUA_Achr6P08230_001	Banana	mitochondrion	46.94	17.04
GSMUA_AchrUn_...	Banana	mitochondrion	46.26	16.83
GSMUA_Achr1P22060_001	Banana	mitochondrion	44.22	16.67
GSMUA_Achr10P...	Banana	mitochondrion	46.94	15.75

Protein Annotations

EnsemblPlants:GSMUA_Achr4P27580_001	EnsemblPlants:GSMUA_Achr4T27580_001	EnsemblPlantsGene:GSMUA_Achr4G27580_001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	SEG:seg	UniParc:UPI00029482F1
UniProt:M0SSM0	MapMan:16.12.5.1	:	:	:	:

Description

DAG protein, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G27580_001]

Coordinates

chr4:+:26339566..26342472

Molecular Weight (calculated)

17073.1 Da

IEP (calculated)

5.396

GRAVY (calculated)

-0.908

Length

147 amino acids

Sequence
(BLAST)

001: MAPLFPGCDY EHWLIVMDKP GGERATKQQM IDCYVQTLAK VVGGEEEAKK KIYNVSCERY FGFGCEIDEE TSNKLEGLPG VLFVLPDSYV DAENKDYGAE
101: LFANGEIVQR PPERQRRIDA ATTQRNDRDR PRYNDRTRYV RRRESQR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.