Factsheet for Os06t0116600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 7
plastid 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0656300-01
Os03t0635800-01
Os06t0679100-00
Os10t0512800-01
Os12t0604200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	Os02t0656300-01	AT3G48150.1	21798944
AT1G32580.1	Os06t0679100-00	AT3G48150.1	21798944
AT2G35240.1	Os03t0635800-01	AT4G14740.1	21798944
AT2G35240.1	Os12t0604200-00	AT4G14740.1	21798944
AT2G35240.1	Os10t0512800-01	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G032330.2	Barley	cytosol	60.0	90.83
GSMUA_Achr6P01260_001	Banana	cytosol	78.79	88.44
GSMUA_Achr4P27580_001	Banana	cytosol	77.58	87.07
CDX79529	Canola	cytosol	62.42	85.12
Zm00001d045528_P001	Maize	mitochondrion	95.15	70.4
CDY58181	Canola	cytosol	71.52	70.24
EER87743	Sorghum	mitochondrion	93.94	69.82
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	95.15	67.67
Bra017328.1-P	Field mustard	cytosol	75.76	67.2
TraesCS4A01G437100.1	Wheat	mitochondrion	94.55	66.38
HORVU7Hr1G008880.2	Barley	plastid	95.15	65.42
TraesCS7A01G050200.1	Wheat	mitochondrion	93.33	65.25
TraesCS6D01G007100.1	Wheat	mitochondrion	93.94	64.32
PGSC0003DMT400038117	Potato	plastid	89.09	63.64
VIT_05s0049g01500.t01	Wine grape	plastid	89.7	63.52
CDY37719	Canola	plastid	84.85	63.06
Bra021852.1-P	Field mustard	plastid	84.85	63.06
KRH31686	Soybean	mitochondrion	84.24	62.33
Solyc06g008220.2.1	Tomato	plastid	89.7	61.92
CDY23734	Canola	plastid	85.45	61.84
Bra017613.1-P	Field mustard	plastid	25.45	61.76
CDY17174	Canola	plastid	86.06	61.74
Bra005495.1-P	Field mustard	plastid	86.06	61.74
TraesCS6A01G005300.1	Wheat	plastid	92.73	61.2
CDY19491	Canola	plastid	85.45	61.04
HORVU6Hr1G002030.1	Barley	plastid	94.55	60.7
TraesCS6B01G010000.1	Wheat	plastid	92.12	60.56
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	86.06	60.17
KRG92352	Soybean	mitochondrion, plastid	85.45	59.49
PGSC0003DMT400060429	Potato	plastid	83.03	58.55
HORVU5Hr1G072150.9	Barley	mitochondrion	60.61	58.14
Solyc05g054960.2.1	Tomato	plastid	82.42	58.12
AT1G32580.1	Thale cress	mitochondrion, plastid	80.0	57.64
CDX84224	Canola	mitochondrion, plastid	80.0	57.39
Bra036402.1-P	Field mustard	mitochondrion, plastid	76.36	56.5
CDY65831	Canola	mitochondrion, plastid	75.76	56.05
CDY31675	Canola	plastid	79.39	55.98
Bra005357.1-P	Field mustard	plastid	79.39	55.98
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	86.06	54.83
AT2G35240.1	Thale cress	mitochondrion, plastid	76.97	54.74
KRH34443	Soybean	plastid	87.27	54.55
Bra023005.1-P	Field mustard	endoplasmic reticulum	27.88	49.46
CDX79597	Canola	plastid	64.85	45.92
TraesCS3A01G476100.2	Wheat	plastid	48.48	44.94
CDX84615	Canola	mitochondrion	39.39	36.31
HORVU2Hr1G040170.17	Barley	mitochondrion	59.39	35.9
Os03t0581600-01	Rice	mitochondrion	46.67	33.77
Os08t0139100-01	Rice	plastid	41.21	29.69
Os09t0509000-01	Rice	plastid	47.88	19.95
Os09t0132600-01	Rice	mitochondrion	47.88	19.85
Os11t0216400-01	Rice	mitochondrion	40.61	17.91

Protein Annotations

EnsemblPlants:Os06t0116600-01	EnsemblPlantsGene:Os06g0116600	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	ProteinID:BAD67917.1	ProteinID:BAF18536.1	ProteinID:BAS95851.1
ProteinID:EEE64991.1	SEG:seg	UniParc:UPI0000457CF5	UniProt:Q5VRK8	MapMan:16.12.5.1	:

Description

Proteinase inhibitor, propeptide domain containing protein. (Os06t0116600-01)

Coordinates

chr6:+:922217..925181

Molecular Weight (calculated)

18882.4 Da

IEP (calculated)

7.134

GRAVY (calculated)

-0.733

Length

165 amino acids

Sequence
(BLAST)

001: MAAAAAAAAR RLLSRRAPTE MAPLFPGCDY EHWLIVMDKP GGEGATKQQM IDCYIQTLAK VLGSEEEAKK KIYNVSCERY FGFGCEIDEE TSNKLEGLPG
101: VLFVLPDSYV DPEYKDYGAE LFVNGEIVQR SPERQRRVEP VPQRASDRPR YNDRTRYARR RENQR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.