CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021852.1-P	Field mustard	plastid	97.75	97.75
CDX79529	Canola	cytosol	52.7	96.69
CDY23734	Canola	plastid	92.79	90.35
CDY19491	Canola	plastid	89.64	86.15
GSMUA_Achr4P27580_001	Banana	cytosol	56.31	85.03
GSMUA_Achr6P01260_001	Banana	cytosol	56.31	85.03
Os06t0116600-01	Rice	mitochondrion	63.06	84.85
CDY17174	Canola	plastid	87.84	84.78
HORVU0Hr1G032330.2	Barley	cytosol	40.99	83.49
CDY58181	Canola	cytosol	55.86	73.81
EES11377	Sorghum	mitochondrion, plastid	69.37	71.3
TraesCS2D01G434600.1	Wheat	plastid	68.92	71.16
TraesCS2B01G457700.1	Wheat	plastid	68.02	70.56
TraesCS2A01G437600.1	Wheat	plastid	68.02	70.56
Zm00001d026243_P002	Maize	extracellular	68.47	70.05
KRG92352	Soybean	mitochondrion, plastid	73.42	68.78
KRH31686	Soybean	mitochondrion	68.92	68.61
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	71.62	67.37
Zm00001d045528_P001	Maize	mitochondrion	66.22	65.92
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	68.47	65.52
CDX84224	Canola	mitochondrion, plastid	67.12	64.78
TraesCS4A01G437100.1	Wheat	mitochondrion	68.47	64.68
EER87743	Sorghum	mitochondrion	64.41	64.41
TraesCS7A01G050200.1	Wheat	mitochondrion	68.02	63.98
HORVU7Hr1G008880.2	Barley	plastid	68.92	63.75
CDY31675	Canola	plastid	67.12	63.68
PGSC0003DMT400060429	Potato	plastid	66.67	63.25
KRH34443	Soybean	plastid	74.77	62.88
Solyc05g054960.2.1	Tomato	plastid	65.77	62.39
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	71.62	61.39
CDY65831	Canola	mitochondrion, plastid	61.26	60.99
HORVU5Hr1G072150.9	Barley	mitochondrion	46.4	59.88
TraesCS6D01G007100.1	Wheat	mitochondrion	64.86	59.75
TraesCS6A01G005300.1	Wheat	plastid	64.86	57.6
TraesCS6B01G010000.1	Wheat	plastid	64.86	57.37
HORVU6Hr1G002030.1	Barley	plastid	65.32	56.42
HORVU1Hr1G057120.1	Barley	plastid	34.68	50.33
CDX79597	Canola	plastid	52.25	49.79
TraesCS3A01G476100.2	Wheat	plastid	35.14	43.82
CDX97960	Canola	cytosol	28.83	41.56
CDX84615	Canola	mitochondrion	33.33	41.34
CDY20996	Canola	cytosol	28.38	41.18
CDX74079	Canola	cytosol	26.58	40.14
CDY34929	Canola	cytosol	24.77	39.29
CDY08033	Canola	mitochondrion	36.49	37.67
HORVU2Hr1G040170.17	Barley	mitochondrion	44.59	36.26
CDY37239	Canola	cytosol	18.47	31.3
CDY49781	Canola	plastid	33.33	30.83
CDX72924	Canola	mitochondrion	24.77	30.05
CDX68262	Canola	mitochondrion	24.77	28.95
CDX96416	Canola	mitochondrion	24.32	28.42
CDY57037	Canola	mitochondrion	31.98	27.41
CDY65020	Canola	mitochondrion	22.97	26.84
CDY20096	Canola	plastid	32.88	23.25
CDX97626	Canola	plastid	36.94	22.53
CDX98522	Canola	plastid	36.94	22.1
CDX98651	Canola	mitochondrion	31.08	21.36
CDX82454	Canola	mitochondrion, plastid	36.94	21.08
CDX75801	Canola	mitochondrion, plastid	36.49	20.3
CDX78969	Canola	mitochondrion	31.08	18.02
CDY50054	Canola	mitochondrion	30.63	17.89
CDY01629	Canola	mitochondrion	30.63	17.3
CDY32326	Canola	cytosol	27.48	17.28
CDY60655	Canola	plastid	26.13	8.03

Protein Annotations

EnsemblPlants:CDY37719	EnsemblPlantsGene:GSBRNA2T00064619001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	ProteinID:CDY37719	ProteinID:CDY37719.1	SEG:seg
UniParc:UPI0004EDB1FE	UniProt:A0A078HK87	MapMan:16.12.5.1	:	:	:

Description

BnaA04g19490DBnaA04g19490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK87]

Coordinates

chrLK032406:-:203998..205796

Molecular Weight (calculated)

24975.5 Da

IEP (calculated)

8.105

GRAVY (calculated)

-0.715

Length

222 amino acids

Sequence
(BLAST)

001: MALPISGTRH LTRSLLSNTT LLAPPKLPSS VRCGGFSPTH DAVVPRFTSL RCRANRSGSA YSPLNSGSNF SDRPPTEMAP LFPGCDYEHW LIVMDKPGGE
101: GATKQEMIDC YVQTLAKVVG SEEEAKKRIY NVSCERYLGF GCEIDEETST KLEGLPGVLF VLPDSYVDPE NKDYGAELFV NGEIVQRSPE RQRRVEPQPQ
201: RAQDRPRYND RTRYSRRKEN TR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.