Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021584.1-P | Field mustard | plastid | 71.39 | 75.68 |
| CDY20096 | Canola | plastid | 61.47 | 69.11 |
| CDX82454 | Canola | mitochondrion, plastid | 70.82 | 64.27 |
| CDX75801 | Canola | mitochondrion, plastid | 71.95 | 63.66 |
| CDX98522 | Canola | plastid | 63.74 | 60.65 |
| AT3G15000.1 | Thale cress | plastid | 66.57 | 59.49 |
| CDX97626 | Canola | plastid | 59.77 | 57.97 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 54.67 | 45.84 |
| KRH27318 | Soybean | nucleus | 43.06 | 41.87 |
| KRH21995 | Soybean | plastid | 47.03 | 41.4 |
| Solyc10g007180.2.1 | Tomato | plastid | 45.04 | 40.66 |
| PGSC0003DMT400039805 | Potato | plastid | 45.89 | 40.2 |
| EER92766 | Sorghum | mitochondrion | 43.91 | 39.95 |
| Os09t0509000-01 | Rice | plastid | 44.76 | 39.9 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 45.61 | 39.17 |
| CDY08033 | Canola | mitochondrion | 23.8 | 39.07 |
| TraesCS5A01G291000.1 | Wheat | mitochondrion | 43.63 | 38.69 |
| Os09t0132600-01 | Rice | mitochondrion | 43.63 | 38.69 |
| TraesCS5B01G290000.1 | Wheat | mitochondrion, plastid | 36.83 | 38.58 |
| TraesCS5B01G289900.1 | Wheat | nucleus | 43.63 | 38.21 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 43.34 | 38.06 |
| Solyc12g014230.1.1 | Tomato | nucleus | 45.89 | 37.76 |
| HORVU5Hr1G077020.3 | Barley | mitochondrion | 43.34 | 37.59 |
| EER92767 | Sorghum | mitochondrion | 35.69 | 36.31 |
| Zm00001d048291_P001 | Maize | mitochondrion | 41.36 | 35.61 |
| TraesCS7B01G160200.1 | Wheat | mitochondrion | 41.36 | 35.1 |
| TraesCS7A01G262500.1 | Wheat | mitochondrion | 41.08 | 34.86 |
| CDX74079 | Canola | cytosol | 14.16 | 34.01 |
| TraesCS7D01G263300.1 | Wheat | mitochondrion | 41.36 | 33.87 |
| CDY34929 | Canola | cytosol | 13.31 | 33.57 |
| HORVU7Hr1G054850.2 | Barley | plastid | 40.79 | 33.26 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 37.96 | 33.17 |
| GSMUA_Achr6P08230_001 | Banana | mitochondrion | 37.96 | 33.09 |
| CDY20996 | Canola | cytosol | 14.16 | 32.68 |
| CDX97960 | Canola | cytosol | 14.16 | 32.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 39.94 | 32.19 |
| CDY58181 | Canola | cytosol | 15.01 | 31.55 |
| CDX72924 | Canola | mitochondrion | 15.86 | 30.6 |
| CDX96416 | Canola | mitochondrion | 16.15 | 30.0 |
| CDX79529 | Canola | cytosol | 10.2 | 29.75 |
| CDY65020 | Canola | mitochondrion | 15.3 | 28.42 |
| CDY37719 | Canola | plastid | 17.28 | 27.48 |
| CDX68262 | Canola | mitochondrion | 14.73 | 27.37 |
| CDY17174 | Canola | plastid | 17.28 | 26.52 |
| CDY19491 | Canola | plastid | 17.28 | 26.41 |
| CDY23734 | Canola | plastid | 17.0 | 26.32 |
| CDX84224 | Canola | mitochondrion, plastid | 16.71 | 25.65 |
| CDY65831 | Canola | mitochondrion, plastid | 16.15 | 25.56 |
| CDX79597 | Canola | plastid | 16.71 | 25.32 |
| CDY31675 | Canola | plastid | 16.71 | 25.21 |
| CDY37239 | Canola | cytosol | 9.35 | 25.19 |
| CDY49781 | Canola | plastid | 16.43 | 24.17 |
| CDY57037 | Canola | mitochondrion | 15.86 | 21.62 |
| OQU89756 | Sorghum | plastid | 25.21 | 20.79 |
| CDX78969 | Canola | mitochondrion | 22.38 | 20.63 |
| CDY50054 | Canola | mitochondrion | 21.53 | 20.0 |
| CDY01629 | Canola | mitochondrion | 21.25 | 19.08 |
| CDX98651 | Canola | mitochondrion | 17.28 | 18.89 |
| CDX84615 | Canola | mitochondrion | 8.5 | 16.76 |
| CDY60655 | Canola | plastid | 21.25 | 10.39 |
Protein Annotations
| EnsemblPlants:CDY32326 | EnsemblPlantsGene:GSBRNA2T00051829001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | ProteinID:CDY32326 | ProteinID:CDY32326.1 | SEG:seg |
| UniParc:UPI0004EE837A | UniProt:A0A078H3D0 | MapMan:16.12.5.1 | : | : | : |
Description
BnaC01g36450DBnaC01g36450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3D0]
Coordinates
chrLK032292:-:135167..139912
Molecular Weight (calculated)
38004.6 Da
IEP (calculated)
7.683
GRAVY (calculated)
-0.810
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSTEKLKTH KPDLQQIPYN LTGEEGKEEQ EKDVSLFPVM VRSTAHQKAS FHGVAFHSEA LDTILPLSRT PAAPSLLSRS RPLAAALSSV LRGGFVSVKG
101: LSSQATASSL KDPSPNWSNR PPKETILLDG CDFEHWLVVV DPPQGDLTRD EIIDGYIKTL AQIVGSEEEA RMKIYSVSHR CYFAFGALVS EDLSHKLKEL
201: PNVRWVLPDS YLDVRNKGSP PQRPPMGGPP PPQNYGGPPP PPNNMGGQMP PPNYGGPPPQ NYMGGQRPPT NYGGAPPQTN MGGAPQPNYG GAPPQTNMGG
301: APRQNNMGGG PPPNAGWSGN NNNYQQQSGG MQQPQYQNSY PPNRDGSGNP YQG
101: LSSQATASSL KDPSPNWSNR PPKETILLDG CDFEHWLVVV DPPQGDLTRD EIIDGYIKTL AQIVGSEEEA RMKIYSVSHR CYFAFGALVS EDLSHKLKEL
201: PNVRWVLPDS YLDVRNKGSP PQRPPMGGPP PPQNYGGPPP PPNNMGGQMP PPNYGGPPPQ NYMGGQRPPT NYGGAPPQTN MGGAPQPNYG GAPPQTNMGG
301: APRQNNMGGG PPPNAGWSGN NNNYQQQSGG MQQPQYQNSY PPNRDGSGNP YQG
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
Arabidopsis Description
MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.