Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025315.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY58518 | Canola | cytosol | 89.01 | 89.95 |
| AT3G27960.1 | Thale cress | cytosol | 84.04 | 84.16 |
| VIT_14s0066g01280.t01 | Wine grape | cytosol | 62.2 | 61.64 |
| KRG93305 | Soybean | cytosol | 63.55 | 60.29 |
| KRH56614 | Soybean | cytosol | 63.7 | 60.26 |
| CDX94243 | Canola | cytosol | 24.1 | 58.61 |
| GSMUA_Achr10P... | Banana | cytosol | 55.72 | 56.06 |
| Solyc02g086840.2.1 | Tomato | cytosol | 59.64 | 55.7 |
| Os02t0708400-01 | Rice | plasma membrane | 59.64 | 55.7 |
| EES05647 | Sorghum | cytosol | 59.19 | 55.12 |
| PGSC0003DMT400001405 | Potato | cytosol | 59.19 | 54.89 |
| Zm00001d051589_P001 | Maize | cytosol | 58.73 | 54.7 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 58.13 | 54.52 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 58.13 | 54.44 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 58.13 | 54.37 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 57.83 | 54.08 |
| Zm00001d017793_P001 | Maize | cytosol | 57.53 | 53.58 |
| CDX90092 | Canola | cytosol, mitochondrion | 9.94 | 52.8 |
| CDY05122 | Canola | plastid | 47.74 | 52.22 |
| CDX90788 | Canola | plastid | 47.59 | 52.15 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 55.72 | 51.75 |
| CDY27619 | Canola | nucleus | 49.85 | 50.23 |
| CDY56191 | Canola | cytosol | 50.6 | 47.19 |
| CDY15411 | Canola | mitochondrion | 19.43 | 21.18 |
| CDY19069 | Canola | mitochondrion | 19.28 | 20.78 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | EnsemblPlants:CDX86457 | ProteinID:CDX86457 | ProteinID:CDX86457.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00144605001 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR19959 |
| PANTHER:PTHR19959:SF160 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI000253FC29 | SEG:seg | : | : | : | : |
Description
BnaA06g31740D
Coordinates
chrLK031845:+:1664588..1667423
Molecular Weight (calculated)
73170.1 Da
IEP (calculated)
4.979
GRAVY (calculated)
-0.399
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGESHDRG KDDSAAVQAS PRSPLSSIDL AMDGAMNASI EQLYHNVCEM ESSDDQSPSR ASFISYGAES RIDLELRHLV GGDVGERKKD VVLEKKEESN
101: KESKNREGSL SHKKPEKLAK TSPNSKIPGS RISSRKSPDL RKVSVDEESP ELGPLLLKQA REMVSSGENL NKALDLALRA VKAFEKRAEG ETQQGLNLVM
201: SLHILAAIYA GLGKYNEAVP VLERSIEIPM IEDGEDHSLA KFAGCMQLGD MYGLMGQVEN SLLLYTAGLE IQRQVLGETD PRVGETCRYL AEAHVQAMQF
301: EEASRLCQMA LDIHKENGST ATASIEEAAD RKLMGLICDA KGDYEVALEH YVLASMAMSS QNHREDVASI DCSIGDAYMS LARFDESIFA YQKALAVFKQ
401: SKGESHSSVA SVYVRLADLY NKIGKLRDSK SYCENALRIY LKPSPGTPME EVATGFVEIS AIYQSMNELD QALKLLRRAL KIYVNAPGQQ NTVAGIEAQM
501: GVISYMMGNY PESYNIFKSA VSKFRNSGEK KTAMFGIALN QMGLACVQRY AINEAADLFE EAKGILENEY GPYHPDTLAV YSNLAGTYDA MGRLEDAIEI
601: LEYVVGTREE KLGTANPEVE DEKQRLAALL KEAGRGRIKR NRALLTLLDK NPEIEPNCGQ RPVY
101: KESKNREGSL SHKKPEKLAK TSPNSKIPGS RISSRKSPDL RKVSVDEESP ELGPLLLKQA REMVSSGENL NKALDLALRA VKAFEKRAEG ETQQGLNLVM
201: SLHILAAIYA GLGKYNEAVP VLERSIEIPM IEDGEDHSLA KFAGCMQLGD MYGLMGQVEN SLLLYTAGLE IQRQVLGETD PRVGETCRYL AEAHVQAMQF
301: EEASRLCQMA LDIHKENGST ATASIEEAAD RKLMGLICDA KGDYEVALEH YVLASMAMSS QNHREDVASI DCSIGDAYMS LARFDESIFA YQKALAVFKQ
401: SKGESHSSVA SVYVRLADLY NKIGKLRDSK SYCENALRIY LKPSPGTPME EVATGFVEIS AIYQSMNELD QALKLLRRAL KIYVNAPGQQ NTVAGIEAQM
501: GVISYMMGNY PESYNIFKSA VSKFRNSGEK KTAMFGIALN QMGLACVQRY AINEAADLFE EAKGILENEY GPYHPDTLAV YSNLAGTYDA MGRLEDAIEI
601: LEYVVGTREE KLGTANPEVE DEKQRLAALL KEAGRGRIKR NRALLTLLDK NPEIEPNCGQ RPVY
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.