CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G29810.1	Thale cress	mitochondrion	83.7	82.35
CDY26312	Canola	mitochondrion	75.54	75.54
Solyc02g005510.2.1	Tomato	cytosol	40.76	67.57
KRH42974	Soybean	cytosol	44.02	61.36
KRH21339	Soybean	cytosol	42.39	58.65
CDY35274	Canola	cytosol	36.41	57.27
CDX90215	Canola	cytosol	35.87	56.9
VIT_10s0003g02770.t01	Wine grape	mitochondrion	52.17	54.55
GSMUA_Achr3P31150_001	Banana	mitochondrion	52.72	53.01
TraesCS6B01G348200.1	Wheat	cytosol	44.02	50.62
KRH10960	Soybean	mitochondrion	46.74	47.78
TraesCS3D01G241500.1	Wheat	mitochondrion	45.65	47.46
TraesCS3A01G241300.1	Wheat	mitochondrion	45.65	47.46
HORVU3Hr1G060040.1	Barley	mitochondrion	45.11	46.89
TraesCS3B01G269400.1	Wheat	mitochondrion	45.11	46.89
Zm00001d043963_P001	Maize	mitochondrion	47.83	46.32
OQU93010	Sorghum	mitochondrion	20.11	45.12
Os01t0663500-01	Rice	mitochondrion	44.57	43.16
KXG33050	Sorghum	cytosol	45.65	31.0
CDX71689	Canola	cytosol	16.85	30.1
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	31.52	27.75
TraesCS6A01G318200.5	Wheat	cytosol	30.43	25.69
CDY32642	Canola	plastid	25.54	21.86
CDY38850	Canola	plastid	25.0	21.4

Protein Annotations

KEGG:00790+4.2.1.96	Gene3D:3.30.1360.20	MapMan:50.4.2	GO:A0A078EFK9	EnsemblPlants:CDX99857	ProteinID:CDX99857
ProteinID:CDX99857.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006729	GO:GO:0008124	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00108577001	InterPro:IPR036428	InterPro:PCD_sf
PFAM:PF01329	PANTHER:PTHR12599	MetaCyc:PWY-7158	InterPro:Pterin_deHydtase	SUPFAM:SSF55248	UniParc:UPI0004EF0ABD
SEG:seg	:	:	:	:	:

Description

BnaC05g22790D

Coordinates

chrLK031914:-:613759..615613

Molecular Weight (calculated)

20372.4 Da

IEP (calculated)

9.918

GRAVY (calculated)

-0.264

Length

184 amino acids

Sequence
(BLAST)

001: MSRLLLPSLF SISRKQVLAA SSFRNLYGRH SFVHWTSAAM SQDSASGGSS ASGARTFCSL EDLSAKKCVP CNAKDLRAMT EQSAQELLQK VAGWDMANDN
101: GTLKLHRSWT VKSFTKGLDF FKRVADIAES EGHHPDLHLV GWNNVKIDIW THAIGGLTEN DFILAAKINQ LQVEDLLRKK KVAK

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.