CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g005510.2.1	Tomato	cytosol	43.9	32.43
TraesCS6B01G348200.1	Wheat	cytosol	56.1	28.75
TraesCS3D01G241500.1	Wheat	mitochondrion	59.76	27.68
TraesCS3B01G269400.1	Wheat	mitochondrion	59.76	27.68
TraesCS3A01G241300.1	Wheat	mitochondrion	59.76	27.68
HORVU3Hr1G060040.1	Barley	mitochondrion	59.76	27.68
Bra010809.1-P	Field mustard	cytosol	39.02	27.59
CDX90215	Canola	cytosol	39.02	27.59
Zm00001d043963_P001	Maize	mitochondrion	63.41	27.37
CDY35274	Canola	cytosol	39.02	27.35
KRH21339	Soybean	cytosol	43.9	27.07
Os01t0663500-01	Rice	mitochondrion	59.76	25.79
KRH42974	Soybean	cytosol	40.24	25.0
GSMUA_Achr3P31150_001	Banana	mitochondrion	50.0	22.4
VIT_10s0003g02770.t01	Wine grape	mitochondrion	46.34	21.59
KXG33050	Sorghum	cytosol	69.51	21.03
AT1G29810.1	Thale cress	mitochondrion	47.56	20.86
CDY26312	Canola	mitochondrion	45.12	20.11
CDX99857	Canola	mitochondrion	45.12	20.11
Bra032338.1-P	Field mustard	mitochondrion	45.12	20.11
KRH10960	Soybean	mitochondrion	43.9	20.0
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	39.02	15.31
TraesCS6A01G318200.5	Wheat	cytosol	40.24	15.14
EER93165	Sorghum	plastid	18.29	7.04

Protein Annotations

EnsemblPlants:OQU93010	EnsemblPlantsGene:SORBI_3001G457433	GO:GO:0003674	GO:GO:0003824	GO:GO:0006729	GO:GO:0008124
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036428	InterPro:PCD_sf
KEGG:00790+4.2.1.96	ProteinID:OQU93010	ProteinID:OQU93010.1	SUPFAM:SSF55248	UniParc:UPI000B8BA1F2	UniProt:A0A1Z5SAQ7
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:73343032..73345479

Molecular Weight (calculated)

9288.6 Da

IEP (calculated)

10.417

GRAVY (calculated)

0.171

Length

82 amino acids

Sequence
(BLAST)

1: MMATKLKMRS RAIYRYCELS SNSIILKLHR ALKVKNFVKA LEFFQLVAAI AEEEGGLTSN DFIIAVKIND LTLEGIIRKK AT

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.