Factsheet for Bra032338.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26312	Canola	mitochondrion	100.0	100.0
AT1G29810.1	Thale cress	mitochondrion	73.37	72.19
Solyc02g005510.2.1	Tomato	cytosol	40.76	67.57
KRH42974	Soybean	cytosol	43.48	60.61
KRH21339	Soybean	cytosol	42.39	58.65
Bra010809.1-P	Field mustard	cytosol	35.33	56.03
TraesCS6B01G348200.1	Wheat	cytosol	46.74	53.75
GSMUA_Achr3P31150_001	Banana	mitochondrion	52.72	53.01
VIT_10s0003g02770.t01	Wine grape	mitochondrion	50.54	52.84
TraesCS3D01G241500.1	Wheat	mitochondrion	47.83	49.72
HORVU3Hr1G060040.1	Barley	mitochondrion	46.74	48.59
TraesCS3A01G241300.1	Wheat	mitochondrion	46.74	48.59
TraesCS3B01G269400.1	Wheat	mitochondrion	46.74	48.59
KRH10960	Soybean	mitochondrion	46.2	47.22
Zm00001d043963_P001	Maize	mitochondrion	47.28	45.79
OQU93010	Sorghum	mitochondrion	20.11	45.12
Os01t0663500-01	Rice	mitochondrion	44.02	42.63
KXG33050	Sorghum	cytosol	46.2	31.37
TraesCS6A01G318200.5	Wheat	cytosol	32.61	27.52
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	29.89	26.32
Bra029188.1-P	Field mustard	plastid	26.09	22.33

Protein Annotations

EnsemblPlants:Bra032338.1	EnsemblPlants:Bra032338.1-P	EnsemblPlantsGene:Bra032338	Gene3D:3.30.1360.20	GO:GO:0003674	GO:GO:0003824
GO:GO:0006729	GO:GO:0008124	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR036428	InterPro:PCD_sf	InterPro:Pterin_deHydtase	KEGG:00790+4.2.1.96	PANTHER:PTHR12599	PFAM:PF01329
SUPFAM:SSF55248	UniParc:UPI0002542637	UniProt:M4EU56	MapMan:50.4.2	:	:

Description

AT1G29810 (E=2e-082) | dehydratase family

Coordinates

chrA09:+:22437606..22439038

Molecular Weight (calculated)

20574.7 Da

IEP (calculated)

10.269

GRAVY (calculated)

-0.299

Length

184 amino acids

Sequence
(BLAST)

001: MSRLLLPRLF SISRKQVLAA SSFRNQYDGR HRSFVHWTSA AMSRATGGSS ASVATPFCSL QDLSAKKCVP CNAKDLRAMT EQSAQELLQK VPGWDMANDN
101: GTLKLHRSWV VKSFTKGLDF FKRVADIAES EGHHPDLHLV GWNNVKIDIW THAIGGLTEN DFILAAKINE LQVEDLLRKK KVAK

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.