Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G241500.1 Wheat mitochondrion 93.22 93.22
TraesCS3A01G241300.1 Wheat mitochondrion 92.09 92.09
TraesCS3B01G269400.1 Wheat mitochondrion 86.44 86.44
Solyc02g005510.2.1 Tomato cytosol 39.55 63.06
OQU93010 Sorghum mitochondrion 27.68 59.76
Os01t0663500-01 Rice mitochondrion 62.71 58.42
KRH21339 Soybean cytosol 41.81 55.64
Zm00001d043963_P001 Maize mitochondrion 56.5 52.63
KRH42974 Soybean cytosol 38.98 52.27
GSMUA_Achr3P31150_001 Banana mitochondrion 49.15 47.54
CDY26312 Canola mitochondrion 48.59 46.74
Bra032338.1-P Field mustard mitochondrion 48.59 46.74
AT1G29810.1 Thale cress mitochondrion 49.15 46.52
CDY35274 Canola cytosol 30.51 46.15
CDX90215 Canola cytosol 29.94 45.69
Bra010809.1-P Field mustard cytosol 29.94 45.69
VIT_10s0003g02770.t01 Wine grape mitochondrion 45.2 45.45
CDX99857 Canola mitochondrion 46.89 45.11
KRH10960 Soybean mitochondrion 45.2 44.44
KXG33050 Sorghum cytosol 58.76 38.38
HORVU4Hr1G090300.6 Barley plastid 9.6 6.64
Protein Annotations
EnsemblPlants:HORVU3Hr1G060040.1EnsemblPlantsGene:HORVU3Hr1G060040Gene3D:3.30.1360.20GO:GO:0003674GO:GO:0003824GO:GO:0006729
GO:GO:0008124GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR036428
InterPro:PCD_sfInterPro:Pterin_deHydtaseKEGG:00790+4.2.1.96PANTHER:PTHR12599PFAM:PF01329SEG:seg
SUPFAM:SSF55248UniParc:UPI0001D64992UniProt:A0A287L8X6MapMan:50.4.2::
Description
No Description!
Coordinates
chrchr3H:-:457544221..457550673
Molecular Weight (calculated)
19628.6 Da
IEP (calculated)
7.674
GRAVY (calculated)
-0.266
Length
177 amino acids
Sequence
(BLAST)
001: MAGLLLRRFM RIQPRAPMTA AGGAAFFNAS CPSSPRTVAH LEVSGEQASP KVELSEKSCI PCNSMDLHAM SEDSAKKSLE QVTGWELKNE GDILKLHRAW
101: KVKNFVKGLE FFQLVAAVAE EEGHHPDLHL VSWNNVKIDV WTHSVRGLTD NDFILAAKIN ELKLEGLLSK KKATTHE
Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)
001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK
Arabidopsis Description
PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.