CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21339	Soybean	cytosol	71.97	71.43
Solyc02g005510.2.1	Tomato	cytosol	55.3	65.77
KRH10960	Soybean	mitochondrion	70.45	51.67
VIT_10s0003g02770.t01	Wine grape	mitochondrion	64.39	48.3
CDY35274	Canola	cytosol	41.67	47.01
Bra010809.1-P	Field mustard	cytosol	40.91	46.55
CDX90215	Canola	cytosol	40.91	46.55
TraesCS6B01G348200.1	Wheat	cytosol	56.06	46.25
CDX99857	Canola	mitochondrion	61.36	44.02
AT1G29810.1	Thale cress	mitochondrion	62.12	43.85
GSMUA_Achr3P31150_001	Banana	mitochondrion	60.61	43.72
CDY26312	Canola	mitochondrion	60.61	43.48
Bra032338.1-P	Field mustard	mitochondrion	60.61	43.48
OQU93010	Sorghum	mitochondrion	25.0	40.24
TraesCS3B01G269400.1	Wheat	mitochondrion	53.79	40.11
TraesCS3D01G241500.1	Wheat	mitochondrion	53.03	39.55
HORVU3Hr1G060040.1	Barley	mitochondrion	52.27	38.98
TraesCS3A01G241300.1	Wheat	mitochondrion	52.27	38.98
Zm00001d043963_P001	Maize	mitochondrion	56.06	38.95
Os01t0663500-01	Rice	mitochondrion	53.03	36.84
KXG33050	Sorghum	cytosol	56.06	27.31
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	36.36	22.97
TraesCS6A01G318200.5	Wheat	cytosol	37.88	22.94
KRH70391	Soybean	plastid	34.09	20.93
KRH33344	Soybean	plastid	32.58	19.91

Protein Annotations

KEGG:00790+4.2.1.96	EntrezGene:100779634	Gene3D:3.30.1360.20	MapMan:50.4.2	EMBL:ACUP02004841	EMBL:BT095818
UniProt:C6TE00	EnsemblPlantsGene:GLYMA_08G123200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006729	GO:GO:0008124
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036428	EnsemblPlants:KRH42974
ProteinID:KRH42974	ProteinID:KRH42974.1	InterPro:PCD_sf	PFAM:PF01329	PANTHER:PTHR12599	MetaCyc:PWY-7158
InterPro:Pterin_deHydtase	SUPFAM:SSF55248	UniParc:UPI0001B16965	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:9476181..9479348

Molecular Weight (calculated)

15000.2 Da

IEP (calculated)

7.059

GRAVY (calculated)

-0.264

Length

132 amino acids

Sequence
(BLAST)

001: MDAKSRISPT RLTDKKCVPC NLKELRPMSE DAAHTLMPQV AEWNLVNEDG VMKLRRSWAV KTFTKGLEFF RIVAVLAENE GHHPDLHLVG WNNVTIEIWT
101: HAVGGLTEND FILAAKIDKL DVLDLLRRKP SD

Best Arabidopsis Sequence Match ( AT1G29810.2 )
(BLAST)

001: MSTDSVRSST TGGSASGART FCSLADLSTK KCVPCNAKDL RAMTEQSAQD LLQKVAGWDL ANDNDTLKLH RSWRVKSFTK GLDFFQRVAD IAESEGHHPD
101: LHLVGWNNVK IEIWTHAIGG LTENDFILAA KINELQVEDL LRKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.