Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G348200.1 | Wheat | cytosol | 46.33 | 63.12 |
| TraesCS6D01G297400.2 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 44.95 | 46.89 |
| TraesCS3A01G241300.1 | Wheat | mitochondrion | 36.24 | 44.63 |
| OQU93010 | Sorghum | mitochondrion | 15.14 | 40.24 |
| KRH21339 | Soybean | cytosol | 23.85 | 39.1 |
| Zm00001d043963_P001 | Maize | mitochondrion | 33.95 | 38.95 |
| Solyc02g005510.2.1 | Tomato | cytosol | 19.72 | 38.74 |
| KRH42974 | Soybean | cytosol | 22.94 | 37.88 |
| Os01t0663500-01 | Rice | mitochondrion | 32.57 | 37.37 |
| GSMUA_Achr3P31150_001 | Banana | mitochondrion | 27.98 | 33.33 |
| CDY26312 | Canola | mitochondrion | 27.52 | 32.61 |
| Bra032338.1-P | Field mustard | mitochondrion | 27.52 | 32.61 |
| KRH10960 | Soybean | mitochondrion | 26.15 | 31.67 |
| CDX90215 | Canola | cytosol | 16.51 | 31.03 |
| Bra010809.1-P | Field mustard | cytosol | 16.51 | 31.03 |
| AT1G29810.1 | Thale cress | mitochondrion | 26.15 | 30.48 |
| CDX99857 | Canola | mitochondrion | 25.69 | 30.43 |
| CDY35274 | Canola | cytosol | 16.05 | 29.91 |
| KXG33050 | Sorghum | cytosol | 33.95 | 27.31 |
| VIT_10s0003g02770.t01 | Wine grape | mitochondrion | 22.02 | 27.27 |
| TraesCS5A01G545700.1 | Wheat | plastid | 13.3 | 13.81 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G318200.5 | EnsemblPlantsGene:TraesCS6A01G318200 | Gene3D:3.30.1360.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006729 |
| GO:GO:0008124 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR036428 |
| InterPro:PCD_sf | InterPro:Pterin_deHydtase | KEGG:00790+4.2.1.96 | PANTHER:PTHR12599 | PFAM:PF01329 | SUPFAM:SSF55248 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:554458496..554459381
Molecular Weight (calculated)
24472.3 Da
IEP (calculated)
8.699
GRAVY (calculated)
-0.188
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRTLLRDQ AAPSASAPTG RSASQATGDE AAAKVELSKR SCVSCNSKDL QAMSEDSAKT LLEQVAGWEV KNEGGIPKLH RAWKVKNFAK GLEFFQLVAA
101: VAEEEGLLSF ALFFIFTLSR CSEFSFLNSP VLTALEFNNI IGTYRPQQVD VLLTTPMYQN TRRFLIQREY QKTCCILIRM EYYQRGVIHF LSYSPKSPLQ
201: YLTISFGTYR PQQVNAAN
101: VAEEEGLLSF ALFFIFTLSR CSEFSFLNSP VLTALEFNNI IGTYRPQQVD VLLTTPMYQN TRRFLIQREY QKTCCILIRM EYYQRGVIHF LSYSPKSPLQ
201: YLTISFGTYR PQQVNAAN
001: MSTDSVRSST TGGSASGART FCSLADLSTK KCVPCNAKDL RAMTEQSAQD LLQKVAGWDL ANDNDTLKLH RSWRVKSFTK GLDFFQRVAD IAESEGHHPD
101: LHLVGWNNVK IEIWTHAIGG LTENDFILAA KINELQVEDL LRKKKVAK
101: LHLVGWNNVK IEIWTHAIGG LTENDFILAA KINELQVEDL LRKKKVAK
Arabidopsis Description
PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.