Factsheet for TraesCS6B01G348200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G269400.1	Wheat	mitochondrion	72.5	65.54
Solyc02g005510.2.1	Tomato	cytosol	44.38	63.96
KRH21339	Soybean	cytosol	49.38	59.4
Os01t0663500-01	Rice	mitochondrion	66.88	56.32
OQU93010	Sorghum	mitochondrion	28.75	56.1
KRH42974	Soybean	cytosol	46.25	56.06
Zm00001d043963_P001	Maize	mitochondrion	61.25	51.58
GSMUA_Achr3P31150_001	Banana	mitochondrion	56.25	49.18
CDY35274	Canola	cytosol	34.38	47.01
CDY26312	Canola	mitochondrion	53.75	46.74
Bra032338.1-P	Field mustard	mitochondrion	53.75	46.74
CDX90215	Canola	cytosol	33.75	46.55
Bra010809.1-P	Field mustard	cytosol	33.75	46.55
TraesCS6A01G318200.5	Wheat	cytosol	63.12	46.33
KRH10960	Soybean	mitochondrion	51.88	46.11
AT1G29810.1	Thale cress	mitochondrion	53.12	45.45
VIT_10s0003g02770.t01	Wine grape	mitochondrion	48.75	44.32
CDX99857	Canola	mitochondrion	50.62	44.02
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	54.38	41.63
KXG33050	Sorghum	cytosol	62.5	36.9
TraesCS4B01G379500.1	Wheat	plastid	28.12	20.64

Protein Annotations

EnsemblPlants:TraesCS6B01G348200.1	EnsemblPlantsGene:TraesCS6B01G348200	Gene3D:3.30.1360.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0006729
GO:GO:0008124	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036428
InterPro:PCD_sf	InterPro:Pterin_deHydtase	KEGG:00790+4.2.1.96	PANTHER:PTHR12599	PFAM:PF01329	SEG:seg
SUPFAM:SSF55248	TIGR:cd00913	MapMan:50.4.2	:	:	:

Description

No Description!

Coordinates

chr6B:-:613109667..613111804

Molecular Weight (calculated)

17280.5 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.306

Length

160 amino acids

Sequence
(BLAST)

001: MEGRTLLLDQ AAPSASAPTG RSASQATGDE AAAKVELSKR SCVSCNSKDL QAMSEDSAKT LLEQVAGWEV KNEGDILKLH RAWKVKNFAK GLEFFQLVAA
101: VAEEEGHHPD LHLVGWNNVK IDVWTHSVSG LTDNDFILAA KINELKLGGL LSKKKATAQE

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.