Factsheet for Solyc02g005510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42974	Soybean	cytosol	65.77	55.3
KRH21339	Soybean	cytosol	63.96	53.38
CDY35274	Canola	cytosol	52.25	49.57
Bra010809.1-P	Field mustard	cytosol	51.35	49.14
CDX90215	Canola	cytosol	51.35	49.14
TraesCS6B01G348200.1	Wheat	cytosol	63.96	44.38
VIT_10s0003g02770.t01	Wine grape	mitochondrion	70.27	44.32
OQU93010	Sorghum	mitochondrion	32.43	43.9
GSMUA_Achr3P31150_001	Banana	mitochondrion	67.57	40.98
CDY26312	Canola	mitochondrion	67.57	40.76
Bra032338.1-P	Field mustard	mitochondrion	67.57	40.76
CDX99857	Canola	mitochondrion	67.57	40.76
AT1G29810.1	Thale cress	mitochondrion	67.57	40.11
TraesCS3A01G241300.1	Wheat	mitochondrion	63.06	39.55
TraesCS3D01G241500.1	Wheat	mitochondrion	63.06	39.55
HORVU3Hr1G060040.1	Barley	mitochondrion	63.06	39.55
TraesCS3B01G269400.1	Wheat	mitochondrion	62.16	38.98
KRH10960	Soybean	mitochondrion	63.06	38.89
Os01t0663500-01	Rice	mitochondrion	62.16	36.32
Zm00001d043963_P001	Maize	mitochondrion	61.26	35.79
KXG33050	Sorghum	cytosol	60.36	24.72
TraesCS6A01G318200.5	Wheat	cytosol	38.74	19.72
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	36.04	19.14

Protein Annotations

KEGG:00790+4.2.1.96	Gene3D:3.30.1360.20	MapMan:50.4.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006729	GO:GO:0008124
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036428	UniProt:K4B4F2
InterPro:PCD_sf	PFAM:PF01329	PANTHER:PTHR12599	InterPro:Pterin_deHydtase	SUPFAM:SSF55248	EnsemblPlantsGene:Solyc02g005510.2
EnsemblPlants:Solyc02g005510.2.1	UniParc:UPI0002767E9F	:	:	:	:

Description

No Description!

Coordinates

chr2:-:9224503..9227321

Molecular Weight (calculated)

12201.5 Da

IEP (calculated)

5.976

GRAVY (calculated)

-0.261

Length

111 amino acids

Sequence
(BLAST)

001: MTEEAAYQLM PQVSGWDLVN DGGTLKLHKS WKVKTFTKGL EFFQEVASVA EAEGHHPDLH LVGWNNVKID IWTHSVGGLT ENDFILAAKV NGLDVQDLLS
101: KKLSKPAQSS G

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.