CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21339	Soybean	cytosol	60.56	81.95
KRH42974	Soybean	cytosol	51.67	70.45
Solyc02g005510.2.1	Tomato	cytosol	38.89	63.06
TraesCS6B01G348200.1	Wheat	cytosol	46.11	51.88
VIT_10s0003g02770.t01	Wine grape	mitochondrion	49.44	50.57
GSMUA_Achr3P31150_001	Banana	mitochondrion	49.44	48.63
CDX99857	Canola	mitochondrion	47.78	46.74
TraesCS3B01G269400.1	Wheat	mitochondrion	45.56	46.33
CDY26312	Canola	mitochondrion	47.22	46.2
Bra032338.1-P	Field mustard	mitochondrion	47.22	46.2
AT1G29810.1	Thale cress	mitochondrion	47.78	45.99
TraesCS3D01G241500.1	Wheat	mitochondrion	45.0	45.76
HORVU3Hr1G060040.1	Barley	mitochondrion	44.44	45.2
TraesCS3A01G241300.1	Wheat	mitochondrion	44.44	45.2
OQU93010	Sorghum	mitochondrion	20.0	43.9
Zm00001d043963_P001	Maize	mitochondrion	46.11	43.68
Os01t0663500-01	Rice	mitochondrion	45.56	43.16
CDY35274	Canola	cytosol	27.78	42.73
Bra010809.1-P	Field mustard	cytosol	27.22	42.24
CDX90215	Canola	cytosol	27.22	42.24
KXG33050	Sorghum	cytosol	46.67	31.0
TraesCS6A01G318200.5	Wheat	cytosol	31.67	26.15
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	30.0	25.84
KRH70391	Soybean	plastid	28.89	24.19
KRH33344	Soybean	plastid	27.22	22.69

Protein Annotations

KEGG:00790+4.2.1.96	EntrezGene:100810992	Gene3D:3.30.1360.20	MapMan:50.4.2	EMBL:ACUP02009168	EnsemblPlantsGene:GLYMA_15G079000
GO:GO:0003674	GO:GO:0003824	GO:GO:0006729	GO:GO:0008124	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR036428	UniProt:K7MA87	ProteinID:KRH10959.1	EnsemblPlants:KRH10960
ProteinID:KRH10960	ProteinID:KRH10960.1	ProteinID:KRH10961.1	InterPro:PCD_sf	PFAM:PF01329	PANTHER:PTHR12599
MetaCyc:PWY-7158	InterPro:Pterin_deHydtase	SUPFAM:SSF55248	UniParc:UPI000233AE84	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:-:6073322..6076988

Molecular Weight (calculated)

20318.6 Da

IEP (calculated)

9.464

GRAVY (calculated)

-0.254

Length

180 amino acids

Sequence
(BLAST)

001: MNRLLLVRHP LLALSKLPPL SPFSQTYYYS YTPTRINSQI YKIKDPPRTS AAFCTTNKEL SSKKCVPCNT KDLQPMTEDA AGTLLSQIAQ WNLVNEGGVL
101: KLRRSWKVKT FTKGLEFFRI IADLADAEGH HPDLHLVAWN NVTIEICTHS VGGLTQNDFI LAAKINELNL HDLLRRKASD

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.