Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G348200.1 | Wheat | cytosol | 41.63 | 54.38 |
| TraesCS6A01G318200.5 | Wheat | cytosol | 46.89 | 44.95 |
| TraesCS3D01G241500.1 | Wheat | mitochondrion | 37.32 | 44.07 |
| KRH21339 | Soybean | cytosol | 24.88 | 39.1 |
| OQU93010 | Sorghum | mitochondrion | 15.31 | 39.02 |
| KRH42974 | Soybean | cytosol | 22.97 | 36.36 |
| Solyc02g005510.2.1 | Tomato | cytosol | 19.14 | 36.04 |
| Os01t0663500-01 | Rice | mitochondrion | 32.54 | 35.79 |
| Zm00001d043963_P001 | Maize | mitochondrion | 31.58 | 34.74 |
| GSMUA_Achr3P31150_001 | Banana | mitochondrion | 30.14 | 34.43 |
| AT1G29810.1 | Thale cress | mitochondrion | 28.23 | 31.55 |
| CDX99857 | Canola | mitochondrion | 27.75 | 31.52 |
| KRH10960 | Soybean | mitochondrion | 25.84 | 30.0 |
| CDY26312 | Canola | mitochondrion | 26.32 | 29.89 |
| Bra032338.1-P | Field mustard | mitochondrion | 26.32 | 29.89 |
| CDX90215 | Canola | cytosol | 16.27 | 29.31 |
| Bra010809.1-P | Field mustard | cytosol | 16.27 | 29.31 |
| CDY35274 | Canola | cytosol | 16.27 | 29.06 |
| VIT_10s0003g02770.t01 | Wine grape | mitochondrion | 24.4 | 28.98 |
| KXG33050 | Sorghum | cytosol | 33.01 | 25.46 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G297400.2 | EnsemblPlantsGene:TraesCS6D01G297400 | Gene3D:3.30.1360.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006729 |
| GO:GO:0008124 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR036428 |
| InterPro:PCD_sf | InterPro:Pterin_deHydtase | KEGG:00790+4.2.1.96 | PANTHER:PTHR12599 | PFAM:PF01329 | SUPFAM:SSF55248 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:408650259..408651182
Molecular Weight (calculated)
23618.4 Da
IEP (calculated)
9.444
GRAVY (calculated)
-0.276
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRTLLRDQ AAPSASAPTG RSASQATGDE AAAEVGERAP PPQPQLSKRS CVSCNSKDLQ AMSEDSAKTL LEQVTGWEVK NEGDILKLHR AWKVKSFAKG
101: LEFFQLVAAV AEEEGSPFFC SVLRIHVVSL FRIQFFKCPL FSPHWNLTIS LAHTDHSKSM HCLLLPIYQN TRRFLIQRKY QKTSYILIRM EYYQRGVIHF
201: LSYSPKSPL
101: LEFFQLVAAV AEEEGSPFFC SVLRIHVVSL FRIQFFKCPL FSPHWNLTIS LAHTDHSKSM HCLLLPIYQN TRRFLIQRKY QKTSYILIRM EYYQRGVIHF
201: LSYSPKSPL
001: MSTDSVRSST TGGSASGART FCSLADLSTK KCVPCNAKDL RAMTEQSAQD LLQKVAGWDL ANDNDTLKLH RSWRVKSFTK GLDFFQRVAD IAESEGHHPD
101: LHLVGWNNVK IEIWTHAIGG LTENDFILAA KINELQVEDL LRKKKVAK
101: LHLVGWNNVK IEIWTHAIGG LTENDFILAA KINELQVEDL LRKKKVAK
Arabidopsis Description
PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.