Factsheet for Zm00001d043963_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

extracellular: 20408568
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93010	Sorghum	mitochondrion	27.37	63.41
Solyc02g005510.2.1	Tomato	cytosol	35.79	61.26
TraesCS6B01G348200.1	Wheat	cytosol	51.58	61.25
KXG33050	Sorghum	cytosol	82.11	57.56
KRH21339	Soybean	cytosol	40.0	57.14
TraesCS3D01G241500.1	Wheat	mitochondrion	53.16	57.06
TraesCS3B01G269400.1	Wheat	mitochondrion	53.16	57.06
Os01t0663500-01	Rice	mitochondrion	56.84	56.84
HORVU3Hr1G060040.1	Barley	mitochondrion	52.63	56.5
KRH42974	Soybean	cytosol	38.95	56.06
TraesCS3A01G241300.1	Wheat	mitochondrion	52.11	55.93
GSMUA_Achr3P31150_001	Banana	mitochondrion	49.47	51.37
CDY35274	Canola	cytosol	29.47	47.86
CDX99857	Canola	mitochondrion	46.32	47.83
Bra010809.1-P	Field mustard	cytosol	28.95	47.41
CDX90215	Canola	cytosol	28.95	47.41
CDY26312	Canola	mitochondrion	45.79	47.28
Bra032338.1-P	Field mustard	mitochondrion	45.79	47.28
AT1G29810.1	Thale cress	mitochondrion	45.79	46.52
KRH10960	Soybean	mitochondrion	43.68	46.11
VIT_10s0003g02770.t01	Wine grape	mitochondrion	42.63	46.02
TraesCS6A01G318200.5	Wheat	cytosol	38.95	33.95
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	34.74	31.58
Zm00001d034715_P001	Maize	plastid	24.21	21.1

Protein Annotations

KEGG:00790+4.2.1.96	EntrezGene:100282599	Gene3D:3.30.1360.20	MapMan:50.4.2	EMBL:BT084114	UniProt:C4IZW7
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006729	GO:GO:0008124	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR036428	ProteinID:ONM39535.1	InterPro:PCD_sf	PFAM:PF01329	PANTHER:PTHR12599
PANTHER:PTHR12599:SF0	InterPro:Pterin_deHydtase	SUPFAM:SSF55248	UniParc:UPI0001A4C537	EnsemblPlantsGene:Zm00001d043963	EnsemblPlants:Zm00001d043963_P001
EnsemblPlants:Zm00001d043963_T001	:	:	:	:	:

Description

Transcriptional coactivator/pterin dehydratase

Coordinates

chr3:-:215008353..215012223

Molecular Weight (calculated)

21461.0 Da

IEP (calculated)

10.443

GRAVY (calculated)

-0.304

Length

190 amino acids

Sequence
(BLAST)

001: MIRTATVRAR LLLSRSYVAQ AQAASRWPLV RWKASHLGSV RSFYQMDITR QYKNKSLTAR GCHSSPESQE LAMKSCVPCN SKDLGPMSED SAKKLLEQVN
101: GWELITEGGV LKLHRTWKVK NFVKGLEFFQ LVAAIAEEEG HHPDLHLVGW NNVKIDVWTH SVRGLTSNDF ILAAKINHLT LDGIIRKKAK

Best Arabidopsis Sequence Match ( AT1G29810.1 )
(BLAST)

001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.