Factsheet for TraesCS3D01G241500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G241300.1	Wheat	mitochondrion	96.05	96.05
HORVU3Hr1G060040.1	Barley	mitochondrion	93.22	93.22
TraesCS3B01G269400.1	Wheat	mitochondrion	89.83	89.83
Solyc02g005510.2.1	Tomato	cytosol	39.55	63.06
OQU93010	Sorghum	mitochondrion	27.68	59.76
Os01t0663500-01	Rice	mitochondrion	63.84	59.47
KRH21339	Soybean	cytosol	42.37	56.39
Zm00001d043963_P001	Maize	mitochondrion	57.06	53.16
KRH42974	Soybean	cytosol	39.55	53.03
CDY26312	Canola	mitochondrion	49.72	47.83
Bra032338.1-P	Field mustard	mitochondrion	49.72	47.83
GSMUA_Achr3P31150_001	Banana	mitochondrion	49.15	47.54
AT1G29810.1	Thale cress	mitochondrion	49.72	47.06
CDY35274	Canola	cytosol	30.51	46.15
CDX90215	Canola	cytosol	29.94	45.69
Bra010809.1-P	Field mustard	cytosol	29.94	45.69
CDX99857	Canola	mitochondrion	47.46	45.65
KRH10960	Soybean	mitochondrion	45.76	45.0
VIT_10s0003g02770.t01	Wine grape	mitochondrion	44.63	44.89
KXG33050	Sorghum	cytosol	58.76	38.38
TraesCS6D01G297400.2	Wheat	cytosol, mitochondrion, nucleus, peroxisome	44.07	37.32

Protein Annotations

EnsemblPlants:TraesCS3D01G241500.1	EnsemblPlantsGene:TraesCS3D01G241500	Gene3D:3.30.1360.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0006729
GO:GO:0008124	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036428
InterPro:PCD_sf	InterPro:Pterin_deHydtase	KEGG:00790+4.2.1.96	PANTHER:PTHR12599	PFAM:PF01329	SEG:seg
SUPFAM:SSF55248	TIGR:cd00913	MapMan:50.4.2	:	:	:

Description

No Description!

Coordinates

chr3D:+:335627830..335630426

Molecular Weight (calculated)

19508.5 Da

IEP (calculated)

8.126

GRAVY (calculated)

-0.244

Length

177 amino acids

Sequence
(BLAST)

001: MAGLLLRRFI GIQPRAPMTA AGGAALFYAS CPSSPRTVAH LEVRGEQAAA EAELSKKSCI PCNSKDLHAM SEDSAKKSLE QVTGWELKNE GDILKLHRAW
101: KVKNFVKGLE FFQLVAAVAE EEGHHPDLHL VSWNNVKIDV WTHSVRGLTD NDFILAAKIN ELKLEGLLSK KKATSHE

Best Arabidopsis Sequence Match ( AT1G29810.2 )
(BLAST)

001: MSTDSVRSST TGGSASGART FCSLADLSTK KCVPCNAKDL RAMTEQSAQD LLQKVAGWDL ANDNDTLKLH RSWRVKSFTK GLDFFQRVAD IAESEGHHPD
101: LHLVGWNNVK IEIWTHAIGG LTENDFILAA KINELQVEDL LRKKKVAK

Arabidopsis Description

PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.