Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- extracellular 1
- mitochondrion 2
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90215 | Canola | cytosol | 100.0 | 100.0 |
| Solyc02g005510.2.1 | Tomato | cytosol | 49.14 | 51.35 |
| KRH42974 | Soybean | cytosol | 46.55 | 40.91 |
| OQU93010 | Sorghum | mitochondrion | 27.59 | 39.02 |
| KRH21339 | Soybean | cytosol | 43.1 | 37.59 |
| Bra032338.1-P | Field mustard | mitochondrion | 56.03 | 35.33 |
| AT1G29810.1 | Thale cress | mitochondrion | 55.17 | 34.22 |
| TraesCS6B01G348200.1 | Wheat | cytosol | 46.55 | 33.75 |
| GSMUA_Achr3P31150_001 | Banana | mitochondrion | 50.86 | 32.24 |
| VIT_10s0003g02770.t01 | Wine grape | mitochondrion | 45.69 | 30.11 |
| HORVU3Hr1G060040.1 | Barley | mitochondrion | 45.69 | 29.94 |
| TraesCS3D01G241500.1 | Wheat | mitochondrion | 45.69 | 29.94 |
| TraesCS3A01G241300.1 | Wheat | mitochondrion | 45.69 | 29.94 |
| TraesCS3B01G269400.1 | Wheat | mitochondrion | 45.69 | 29.94 |
| Zm00001d043963_P001 | Maize | mitochondrion | 47.41 | 28.95 |
| Os01t0663500-01 | Rice | mitochondrion | 45.69 | 27.89 |
| KRH10960 | Soybean | mitochondrion | 42.24 | 27.22 |
| KXG33050 | Sorghum | cytosol | 46.55 | 19.93 |
| TraesCS6A01G318200.5 | Wheat | cytosol | 31.03 | 16.51 |
| TraesCS6D01G297400.2 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 29.31 | 16.27 |
| Bra029188.1-P | Field mustard | plastid | 27.59 | 14.88 |
Protein Annotations
| EnsemblPlants:Bra010809.1 | EnsemblPlants:Bra010809.1-P | EnsemblPlantsGene:Bra010809 | Gene3D:3.30.1360.20 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006729 | GO:GO:0008124 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR036428 | InterPro:PCD_sf | InterPro:Pterin_deHydtase | KEGG:00790+4.2.1.96 | PANTHER:PTHR12599 | PFAM:PF01329 |
| SEG:seg | SUPFAM:SSF55248 | UniParc:UPI00025470D7 | UniProt:M4D2V6 | MapMan:50.4.2 | : |
Description
AT1G29810 (E=9e-030) | dehydratase family
Coordinates
chrA08:+:16566843..16567441
Molecular Weight (calculated)
13060.7 Da
IEP (calculated)
7.509
GRAVY (calculated)
-0.108
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKACCMLT PELFLSHRLL DGIWLLANDN GTLKLHPSWL VKSFTKGLGF FNRVAKIAEW EGHHPDLLLV GWNNEKIDVW THAIGGLTEN DFICCSDQLA
101: RSGRSSKKEE SFKSIF
101: RSGRSSKKEE SFKSIF
001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK
Arabidopsis Description
PDL2Pterin-4-alpha-carbinolamine dehydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6QJ72]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.