Factsheet for Bra029188.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007711.1-P
Bra007841.1-P
Bra014106.1-P
Bra028651.1-P
Bra029883.1-P
Bra032050.1-P
Bra032085.1-P
Bra036246.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51110.1	Bra007841.1-P	AT2G24550.1	21798944
AT5G51110.1	Bra032085.1-P	AT2G24550.1	21798944
AT5G51110.1	Bra014106.1-P	AT2G47450.1	21798944
AT5G51110.1	Bra029883.1-P	AT3G10970.1	21798944
AT5G51110.1	Bra007711.1-P	AT4G02720.1	21798944
AT5G51110.1	Bra032050.1-P	AT4G02720.1	21798944
AT5G51110.1	Bra036246.1-P	AT4G02720.1	21798944
AT5G51110.1	Bra028651.1-P	AT5G08650.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38850	Canola	plastid	100.0	100.0
AT5G51110.1	Thale cress	plastid	83.26	81.36
VIT_16s0013g00240.t01	Wine grape	plastid	53.49	54.76
KRH33344	Soybean	plastid	54.42	54.17
KRH70391	Soybean	plastid	53.49	53.49
GSMUA_Achr2P18260_001	Banana	plastid	50.7	50.23
TraesCS5A01G545700.1	Wheat	plastid	43.72	44.76
Zm00001d034715_P001	Maize	plastid	45.12	44.5
EER93165	Sorghum	plastid	43.72	44.13
TraesCSU01G129700.1	Wheat	plastid	43.26	43.26
TraesCS4B01G379500.1	Wheat	plastid	43.72	43.12
Os03t0100200-01	Rice	plastid	40.47	42.86
PGSC0003DMT400013443	Potato	plastid	40.93	41.71
Bra010809.1-P	Field mustard	cytosol	14.88	27.59
Bra032338.1-P	Field mustard	mitochondrion	22.33	26.09
HORVU4Hr1G090300.6	Barley	plastid	22.33	18.75

Protein Annotations

KEGG:00790+4.2.1.96	MapMan:1.2.1.2.6	Gene3D:3.30.1360.20	EnsemblPlantsGene:Bra029188	EnsemblPlants:Bra029188.1	EnsemblPlants:Bra029188.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006729	GO:GO:0006950	GO:GO:0008124	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	GO:GO:0071944	GO:GO:0110102
InterPro:IPR036428	UniProt:M4EK71	InterPro:PCD_sf	PFAM:PF01329	PANTHER:PTHR12599	PANTHER:PTHR12599:SF8
InterPro:Pterin_deHydtase	SUPFAM:SSF55248	UniParc:UPI0002540160	:	:	:

Description

AT5G51110 (E=6e-098) | 4-alpha-hydroxytetrahydrobiopterin dehydratase

Coordinates

chrA03:+:6761821..6763203

Molecular Weight (calculated)

23358.0 Da

IEP (calculated)

7.099

GRAVY (calculated)

-0.168

Length

215 amino acids

Sequence
(BLAST)

001: MAATTSSPPC HISVSFLRQL PPCTTVQFFG FSPTQRKLGG LTVARNNLAQ DFLGDWGARD PYPEEIASQF GDKVLGPQST EHKILIPNAS VLSLSQLECS
101: PVSPSQAPLS PDEAKALLHK VLGWSIVEDE AGGMKIRCMW KVRDFGCGVE LINRIHKVAE ASGHYPSLHL ESPTQVRAEL STSSIGGLSM NDFIMAAKID
201: DIKTSDLSPR KRAWA

Best Arabidopsis Sequence Match ( AT5G51110.1 )
(BLAST)

001: MAATSSSPPC NISASSLLLR QPSRSILKVF GLLPPVSRNN RKLGRLTVTR SNLAQDFLGD FGARDPYPEE IASQFGDKVL GCQSTEHKIL IPNASVLSLS
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA

Arabidopsis Description

ATP1Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU63]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.