Factsheet for Os03t0100200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0131900-01
Os05t0168300-01
Os06t0698748-02
Os08t0516900-01
Os09t0455400-01
Os09t0499000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51110.1	Os06t0698748-02	AT2G24550.1	21798944
AT5G51110.1	Os08t0516900-01	AT2G24550.1	21798944
AT5G51110.1	Os09t0499000-01	AT2G24550.1	21798944
AT5G51110.1	Os03t0131900-01	AT2G47450.1	21798944
AT5G51110.1	Os05t0168300-01	AT3G10970.1	21798944
AT5G51110.1	Os09t0455400-01	AT4G02720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93165	Sorghum	plastid	67.49	64.32
Zm00001d034715_P001	Maize	plastid	66.5	61.93
TraesCSU01G129700.1	Wheat	plastid	62.56	59.07
TraesCS5A01G545700.1	Wheat	plastid	60.59	58.57
TraesCS4B01G379500.1	Wheat	plastid	62.07	57.8
GSMUA_Achr2P18260_001	Banana	plastid	49.75	46.54
VIT_16s0013g00240.t01	Wine grape	plastid	46.8	45.24
KRH70391	Soybean	plastid	44.34	41.86
KRH33344	Soybean	plastid	44.34	41.67
CDY38850	Canola	plastid	42.86	40.47
CDY32642	Canola	plastid	42.86	40.47
Bra029188.1-P	Field mustard	plastid	42.86	40.47
AT5G51110.1	Thale cress	plastid	42.86	39.55
PGSC0003DMT400013443	Potato	plastid	36.95	35.55
CDX71689	Canola	cytosol	15.76	31.07
HORVU4Hr1G090300.6	Barley	plastid	32.02	25.39
Os01t0663500-01	Rice	mitochondrion	16.26	17.37

Protein Annotations

KEGG:00790+4.2.1.96	MapMan:1.2.1.2.6	EntrezGene:107277382	Gene3D:3.30.1360.20	ProteinID:ABF93463.1	EMBL:AK072547
EMBL:AK104982	ProteinID:BAH91954.1	ProteinID:BAS81806.1	ProteinID:EAZ25243.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006729
GO:GO:0006950	GO:GO:0008124	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737
GO:GO:0009987	GO:GO:0016043	GO:GO:0071944	GO:GO:0110102	InterPro:IPR036428	EnsemblPlantsGene:Os03g0100200
EnsemblPlants:Os03t0100200-01	InterPro:PCD_sf	PFAM:PF01329	PANTHER:PTHR12599	PANTHER:PTHR12599:SF8	InterPro:Pterin_deHydtase
UniProt:Q10T66	SUPFAM:SSF55248	UniParc:UPI0000DB4BD6	RefSeq:XP_015628426.1	SEG:seg	:

Description

Transcriptional coactivator/pterin dehydratase family protein. (Os03t0100200-01)

Coordinates

chr3:-:27179..28059

Molecular Weight (calculated)

21977.8 Da

IEP (calculated)

7.992

GRAVY (calculated)

0.092

Length

203 amino acids

Sequence
(BLAST)

001: MALTNHILAP AAAAACCFGR RVPLPPPHQL AVRRKQKSVV VAMADLLGDF GARDPFPEEI ESNFGERVLG NVDTLHNILI PTLSVLSIAR LPLEPNPAPV
101: DAADARRLLH KVVGWRLLDD ADGMRLQCVW KVRDEACGHE LVARINAAVD GAPATVVFEA PNQVRAELQT PSAGGLTVND FIVAARIDKV KTVDLIPKKR
201: VWA

Best Arabidopsis Sequence Match ( AT5G51110.2 )
(BLAST)

001: MAATSSSPPC NISASSLLLR QPSRSILKDF LGDFGARDPY PEEIASQFGD KVLGCQSTEH KILIPNASVL SLSQLQCSPV SSSQPPLSGD DARTLLHKVL
101: GWSIVDNEAG GLKIRCMWKV RDFGCGVELI NRIHKVAEAS GHYPSLHLES PTQVRAELFT SSIGGLSMND FIMAAKIDDI KTSDLSPRKR AWA

Arabidopsis Description

ATP1Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU63]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.