Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38850 | Canola | plastid | 96.28 | 96.28 |
| AT5G51110.1 | Thale cress | plastid | 82.33 | 80.45 |
| CDX71689 | Canola | cytosol | 34.88 | 72.82 |
| KRH33344 | Soybean | plastid | 55.81 | 55.56 |
| VIT_16s0013g00240.t01 | Wine grape | plastid | 53.95 | 55.24 |
| KRH70391 | Soybean | plastid | 54.88 | 54.88 |
| GSMUA_Achr2P18260_001 | Banana | plastid | 49.3 | 48.85 |
| TraesCS5A01G545700.1 | Wheat | plastid | 44.65 | 45.71 |
| TraesCSU01G129700.1 | Wheat | plastid | 44.19 | 44.19 |
| TraesCS4B01G379500.1 | Wheat | plastid | 44.65 | 44.04 |
| EER93165 | Sorghum | plastid | 42.79 | 43.19 |
| Zm00001d034715_P001 | Maize | plastid | 43.72 | 43.12 |
| Os03t0100200-01 | Rice | plastid | 40.47 | 42.86 |
| PGSC0003DMT400013443 | Potato | plastid | 41.86 | 42.65 |
| CDX90215 | Canola | cytosol | 14.88 | 27.59 |
| CDY35274 | Canola | cytosol | 14.88 | 27.35 |
| CDY26312 | Canola | mitochondrion | 22.79 | 26.63 |
| CDX99857 | Canola | mitochondrion | 21.86 | 25.54 |
| HORVU4Hr1G090300.6 | Barley | plastid | 21.86 | 18.36 |
Protein Annotations
| KEGG:00790+4.2.1.96 | MapMan:1.2.1.2.6 | Gene3D:3.30.1360.20 | GO:A0A078H5B4 | UniProt:A0A078H5B4 | EnsemblPlants:CDY32642 |
| ProteinID:CDY32642 | ProteinID:CDY32642.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006729 | GO:GO:0008124 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00052677001 | InterPro:IPR036428 |
| InterPro:PCD_sf | PFAM:PF01329 | PANTHER:PTHR12599 | PANTHER:PTHR12599:SF8 | MetaCyc:PWY-7158 | InterPro:Pterin_deHydtase |
| SUPFAM:SSF55248 | UniParc:UPI0004EBD20F | : | : | : | : |
Description
BnaC03g16100DBnaC03g16100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5B4]
Coordinates
chrLK032297:+:389182..390784
Molecular Weight (calculated)
23306.9 Da
IEP (calculated)
7.506
GRAVY (calculated)
-0.126
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTTSSPPC HISVSFLRQL PPCTTVQFFG FSPTQRKLGG LTVARNNLAQ DFLGDFGARD PYPAEIASQF GDKVLGPQST EHKILIPNAS VLSLSQLECS
101: PVSPSQAPLS PDEAKTLLHK VLGWSIVEDE AGGLKIRCMW KVRDFGCGVE LINRIHKVAD ASGHYPSLHL ESPTQVRAEL STSSIGGLSM NDFIMAAKID
201: DIKTSDLSSR KRVWA
101: PVSPSQAPLS PDEAKTLLHK VLGWSIVEDE AGGLKIRCMW KVRDFGCGVE LINRIHKVAD ASGHYPSLHL ESPTQVRAEL STSSIGGLSM NDFIMAAKID
201: DIKTSDLSSR KRVWA
001: MAATSSSPPC NISASSLLLR QPSRSILKVF GLLPPVSRNN RKLGRLTVTR SNLAQDFLGD FGARDPYPEE IASQFGDKVL GCQSTEHKIL IPNASVLSLS
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA
Arabidopsis Description
ATP1Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU63]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.