Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76805 | Canola | nucleus | 95.33 | 58.61 |
| CDY45582 | Canola | nucleus | 76.67 | 45.63 |
| CDY20324 | Canola | nucleus | 75.33 | 43.8 |
| AT2G24550.1 | Thale cress | nucleus | 69.33 | 42.45 |
| CDY23302 | Canola | nucleus | 46.0 | 31.36 |
| CDY36435 | Canola | nucleus | 44.0 | 30.0 |
| CDX72307 | Canola | nucleus | 42.0 | 29.44 |
| CDY19822 | Canola | nucleus | 42.67 | 27.71 |
| CDX87106 | Canola | nucleus | 42.0 | 27.39 |
| Zm00001d014648_P001 | Maize | nucleus | 32.0 | 26.37 |
| EER88891 | Sorghum | nucleus | 38.0 | 25.91 |
| CDY05462 | Canola | nucleus | 36.67 | 25.58 |
| CDX88142 | Canola | nucleus | 38.0 | 25.11 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 27.33 | 23.84 |
| CDY55465 | Canola | nucleus | 36.67 | 23.5 |
| CDY13436 | Canola | nucleus | 33.33 | 23.36 |
| Os06t0698748-02 | Rice | nucleus | 35.33 | 23.25 |
| Zm00001d036499_P001 | Maize | nucleus | 33.33 | 23.04 |
| TraesCS7B01G325100.1 | Wheat | nucleus | 34.67 | 23.01 |
| CDY05394 | Canola | nucleus | 33.33 | 22.83 |
| TraesCS7D01G416800.1 | Wheat | nucleus | 33.33 | 22.32 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 34.67 | 22.32 |
| Solyc08g068970.2.1 | Tomato | nucleus | 26.0 | 22.03 |
| TraesCS7A01G424800.1 | Wheat | nucleus | 33.33 | 22.03 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 32.0 | 21.72 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 32.0 | 21.33 |
| PGSC0003DMT400086234 | Potato | nucleus | 24.67 | 21.02 |
| KRH61944 | Soybean | nucleus | 35.33 | 20.87 |
| TraesCS5B01G277200.1 | Wheat | nucleus | 33.33 | 20.24 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 33.33 | 20.24 |
| KRH52604 | Soybean | nucleus | 34.0 | 20.24 |
| EER99130 | Sorghum | nucleus | 34.67 | 20.23 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 32.67 | 19.52 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 33.33 | 19.16 |
| Zm00001d006059_P001 | Maize | nucleus | 32.67 | 18.7 |
| Zm00001d021006_P001 | Maize | nucleus | 32.0 | 18.6 |
| Os09t0499000-01 | Rice | nucleus | 32.0 | 18.53 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 33.33 | 18.12 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 32.0 | 17.52 |
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 32.0 | 17.45 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 31.33 | 16.97 |
| KXG25581 | Sorghum | nucleus | 31.33 | 16.91 |
| Zm00001d031545_P001 | Maize | nucleus | 30.0 | 16.54 |
| KRH04949 | Soybean | extracellular, vacuole | 34.67 | 16.2 |
| Zm00001d049768_P001 | Maize | nucleus | 27.33 | 15.77 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 30.67 | 13.98 |
Protein Annotations
| EnsemblPlants:CDY68667 | EnsemblPlantsGene:GSBRNA2T00076581001 | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF15 | ProteinID:CDY68667 | ProteinID:CDY68667.1 |
| SEG:seg | UniParc:UPI0004EDDFB7 | UniProt:A0A078JTB8 | MapMan:35.2 | : | : |
Description
BnaAnng27980DBnaAnng27980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTB8]
Coordinates
chrLK037770:-:1..673
Molecular Weight (calculated)
15631.8 Da
IEP (calculated)
4.060
GRAVY (calculated)
-0.562
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMVGSSFG IGMAACVRDR GGVSAQDKAV PPPALFMADE SGRGGGSQIG LASRLGLSMS NKSAEESSED SSSSIGEISD NEEEDEDDDV SSQGEGGALD
101: SFSSSLEDSL PIKRGLSNHY VGKSKSFGNL MESSNINAKD LEKVENPFNK
101: SFSSSLEDSL PIKRGLSNHY VGKSKSFGNL MESSNINAKD LEKVENPFNK
001: MEVMVGSSFG IGMAAYVRDH RGVSAQDKAV QTALFLADES GRGGSQIGIG LRMSNNNNKS PEESSDSSSS IGESSENEEE EEEDDAVSCQ RGTLDSFSSS
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
Arabidopsis Description
At2g24550/F25P17.15 [Source:UniProtKB/TrEMBL;Acc:Q945P6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.