Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68667 | Canola | cytosol | 42.45 | 69.33 |
| CDY45582 | Canola | nucleus | 70.2 | 68.25 |
| Bra007841.1-P | Field mustard | nucleus | 66.53 | 66.8 |
| CDX76805 | Canola | nucleus | 66.12 | 66.39 |
| Bra032085.1-P | Field mustard | nucleus | 69.8 | 66.28 |
| CDY20324 | Canola | nucleus | 68.57 | 65.12 |
| AT4G31510.1 | Thale cress | nucleus | 47.35 | 54.21 |
| AT5G24890.1 | Thale cress | nucleus | 40.41 | 41.25 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 24.9 | 35.47 |
| KRH61944 | Soybean | nucleus | 34.69 | 33.46 |
| KRH52604 | Soybean | nucleus | 33.88 | 32.94 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 29.8 | 31.33 |
| EER88891 | Sorghum | nucleus | 26.53 | 29.55 |
| Solyc08g068970.2.1 | Tomato | nucleus | 21.22 | 29.38 |
| PGSC0003DMT400086234 | Potato | nucleus | 20.82 | 28.98 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 26.12 | 28.44 |
| Zm00001d014648_P001 | Maize | nucleus | 20.82 | 28.02 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 27.76 | 27.53 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 24.49 | 27.15 |
| TraesCS5B01G277200.1 | Wheat | nucleus | 27.35 | 27.13 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 27.76 | 27.09 |
| TraesCS7B01G325100.1 | Wheat | nucleus | 24.9 | 26.99 |
| TraesCS7D01G416800.1 | Wheat | nucleus | 24.08 | 26.34 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 27.76 | 26.05 |
| TraesCS7A01G424800.1 | Wheat | nucleus | 24.08 | 25.99 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 28.57 | 25.36 |
| EER99130 | Sorghum | nucleus | 26.53 | 25.29 |
| Zm00001d021006_P001 | Maize | nucleus | 26.53 | 25.19 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 28.16 | 25.18 |
| Os09t0499000-01 | Rice | nucleus | 26.53 | 25.1 |
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 28.16 | 25.09 |
| Os06t0698748-02 | Rice | nucleus | 23.27 | 25.0 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 28.16 | 24.91 |
| Zm00001d006059_P001 | Maize | nucleus | 26.12 | 24.43 |
| Zm00001d036499_P001 | Maize | nucleus | 21.63 | 24.42 |
| Zm00001d049768_P001 | Maize | nucleus | 25.31 | 23.85 |
| KRH04949 | Soybean | extracellular, vacuole | 30.61 | 23.36 |
| Zm00001d031545_P001 | Maize | nucleus | 25.71 | 23.16 |
| KXG25581 | Sorghum | nucleus | 25.71 | 22.66 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 25.71 | 19.15 |
Protein Annotations
| MapMan:35.2 | EntrezGene:816991 | ProteinID:AEC07591.1 | EMBL:AF411794 | ArrayExpress:AT2G24550 | EnsemblPlantsGene:AT2G24550 |
| RefSeq:AT2G24550 | TAIR:AT2G24550 | RefSeq:AT2G24550-TAIR-G | EnsemblPlants:AT2G24550.1 | TAIR:AT2G24550.1 | EMBL:AY099874 |
| EMBL:BT000317 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_565573.4 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF15 |
| UniProt:Q945P6 | UniParc:UPI00000AC569 | SEG:seg | : | : | : |
Description
At2g24550/F25P17.15 [Source:UniProtKB/TrEMBL;Acc:Q945P6]
Coordinates
chr2:-:10427856..10429487
Molecular Weight (calculated)
27248.2 Da
IEP (calculated)
4.377
GRAVY (calculated)
-0.974
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMVGSSFG IGMAAYVRDH RGVSAQDKAV QTALFLADES GRGGSQIGIG LRMSNNNNKS PEESSDSSSS IGESSENEEE EEEDDAVSCQ RGTLDSFSSS
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.