Factsheet for Zm00001d031545_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008330_P001
Zm00001d018045_P001
Zm00001d027425_P001
Zm00001d031625_P001
Zm00001d037221_P001
Zm00001d039913_P002
Zm00001d040291_P001
Zm00001d042315_P001
Zm00001d044836_P001
Zm00001d044874_P001
Zm00001d047355_P001
Zm00001d047356_P002
Zm00001d048474_P001
Zm00001d052194_P001
Zm00001d052256_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24550.1	Zm00001d027425_P001	AT2G45660.1	21798944
AT2G24550.1	Zm00001d031625_P001	AT2G45660.1	21798944
AT2G24550.1	Zm00001d039913_P002	AT2G45660.1	21798944
AT2G24550.1	Zm00001d042315_P001	AT2G45660.1	21798944
AT2G24550.1	Zm00001d047355_P001	AT2G45660.1	21798944
AT2G24550.1	Zm00001d047356_P002	AT2G45660.1	21798944
AT2G24550.1	Zm00001d048474_P001	AT2G45660.1	21798944
AT2G24550.1	Zm00001d018045_P001	AT3G47620.1	21798944
AT2G24550.1	Zm00001d037221_P001	AT3G47620.1	21798944
AT2G24550.1	Zm00001d044836_P001	AT3G47620.1	21798944
AT2G24550.1	Zm00001d052256_P001	AT3G47620.1	21798944
AT2G24550.1	Zm00001d008330_P001	AT4G15930.1	21798944
AT2G24550.1	Zm00001d040291_P001	AT4G15930.1	21798944
AT2G24550.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT2G24550.1	Zm00001d052194_P001	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049768_P001	Maize	nucleus	71.32	74.62
KXG25581	Sorghum	nucleus	72.79	71.22
Os08t0516900-01	Rice	nucleus, plasma membrane	58.46	60.92
TraesCS7D01G253100.1	Wheat	mitochondrion, nucleus	55.15	54.55
TraesCS7B01G150700.1	Wheat	mitochondrion, nucleus	54.78	53.79
HORVU7Hr1G052580.1	Barley	nucleus	52.57	52.19
TraesCS7A01G254500.1	Wheat	mitochondrion, nucleus	52.21	51.45
Zm00001d021006_P001	Maize	nucleus	45.96	48.45
Zm00001d006059_P001	Maize	nucleus	45.22	46.95
GSMUA_Achr9P13850_001	Banana	nucleus	38.6	46.67
GSMUA_Achr3P05640_001	Banana	nucleus	36.4	42.49
GSMUA_Achr7P15940_001	Banana	nucleus	33.82	41.63
Zm00001d014648_P001	Maize	nucleus	23.16	34.62
Zm00001d036499_P001	Maize	nucleus	27.57	34.56
CDX87106	Canola	nucleus	27.21	32.17
Bra036527.1-P	Field mustard	nucleus	26.84	31.88
Bra020475.1-P	Field mustard	nucleus	23.9	30.09
CDY68667	Canola	cytosol	16.54	30.0
CDY19822	Canola	nucleus	25.37	29.87
CDY05462	Canola	nucleus	23.53	29.77
Bra009802.1-P	Field mustard	nucleus	24.26	29.07
CDX88142	Canola	nucleus	24.26	29.07
AT4G31510.1	Thale cress	nucleus	22.43	28.5
KRH61944	Soybean	nucleus	26.47	28.35
AT5G24890.1	Thale cress	nucleus	25.0	28.33
CDX72307	Canola	nucleus	22.06	28.04
CDY05394	Canola	nucleus	22.43	27.85
CDY55465	Canola	nucleus	23.9	27.78
Solyc08g068970.2.1	Tomato	nucleus	17.65	27.12
KRH52604	Soybean	nucleus	25.0	26.98
Bra031516.1-P	Field mustard	nucleus	19.85	26.34
CDY36435	Canola	nucleus	20.96	25.91
AT2G24550.1	Thale cress	nucleus	23.16	25.71
VIT_01s0113g00410.t01	Wine grape	mitochondrion, nucleus	16.18	25.58
CDY23302	Canola	nucleus	20.59	25.45
Bra010233.1-P	Field mustard	nucleus	20.59	25.45
Bra032085.1-P	Field mustard	nucleus	23.9	25.19
Bra024004.1-P	Field mustard	nucleus	19.85	25.12
CDY45582	Canola	nucleus	23.16	25.0
CDY20324	Canola	nucleus	23.53	24.81
CDY13436	Canola	nucleus	19.49	24.77
PGSC0003DMT400086234	Potato	nucleus	15.81	24.43
CDX76805	Canola	nucleus	20.96	23.36
Bra007841.1-P	Field mustard	nucleus	20.96	23.36
KRH04949	Soybean	extracellular, vacuole	25.74	21.81

Protein Annotations

EnsemblPlants:Zm00001d031545_P001	EnsemblPlants:Zm00001d031545_T001	EnsemblPlantsGene:Zm00001d031545	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0046982	PANTHER:PTHR33172	PANTHER:PTHR33172:SF4	ProteinID:ONM03120.1
SEG:seg	UniParc:UPI000220B330	UniProt:A0A1D6KJL2	MapMan:35.2	:	:

Description

oligopeptide transporter-like protein

Coordinates

chr1:-:193834072..193835680

Molecular Weight (calculated)

29165.7 Da

IEP (calculated)

4.210

GRAVY (calculated)

-0.906

Length

272 amino acids

Sequence
(BLAST)

001: MSTAVARPAH GGFRRSGSGK PDPDEADRMM RSANGYLVQE EEEEEHGDEA AARREDEDEE DEEAEAVSEA SSIGAASSDS SSSIGENSAS DKEEEEEEDE
101: VESKAQGLGM MGLATLESLD DALPSKRGLS SFYAGKSKSF TSLAEAAAAA AAREIAKPEN PFNKRRRVLQ AWSRRRASCS ALAAAYLPPL LAPDHAVVEE
201: DDEEGADDEE EDEEDEEHGD GGGLRGRRRP PTFPSPRLSV HVAAAGQMAR NGSFRSPRSF SMTDLHSAAG YE

Best Arabidopsis Sequence Match ( AT5G24890.1 )
(BLAST)

001: MELMAKPTFS IEVSQYGTTD LPATEKASSS SSSFETTNEE GVEESGLSRI WSGQTADYSS DSSSIGTPGD SEEDEEESEN ENDDVSSKEL GLRGLASMSS
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ

Arabidopsis Description

At5g24890 [Source:UniProtKB/TrEMBL;Acc:Q8L9W8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.