Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036527.1-P | Field mustard | nucleus | 94.37 | 95.2 |
| CDX87106 | Canola | nucleus | 92.21 | 92.61 |
| CDX88142 | Canola | nucleus | 71.0 | 72.25 |
| CDY55465 | Canola | nucleus | 73.16 | 72.22 |
| AT5G24890.1 | Thale cress | nucleus | 73.59 | 70.83 |
| CDY05394 | Canola | nucleus | 64.5 | 68.04 |
| CDY05462 | Canola | nucleus | 61.9 | 66.51 |
| CDY68667 | Canola | cytosol | 27.71 | 42.67 |
| CDX72307 | Canola | nucleus | 37.23 | 40.19 |
| CDX76805 | Canola | nucleus | 40.69 | 38.52 |
| CDY45582 | Canola | nucleus | 41.56 | 38.1 |
| CDY20324 | Canola | nucleus | 40.69 | 36.43 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 26.41 | 35.47 |
| KRH61944 | Soybean | nucleus | 38.53 | 35.04 |
| KRH52604 | Soybean | nucleus | 37.66 | 34.52 |
| CDY13436 | Canola | nucleus | 31.6 | 34.11 |
| CDY36435 | Canola | nucleus | 32.03 | 33.64 |
| CDY23302 | Canola | nucleus | 32.03 | 33.64 |
| PGSC0003DMT400086234 | Potato | nucleus | 24.68 | 32.39 |
| Solyc08g068970.2.1 | Tomato | nucleus | 23.81 | 31.07 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 30.74 | 30.47 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 31.17 | 29.15 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 28.14 | 28.89 |
| TraesCS5B01G277200.1 | Wheat | nucleus | 30.3 | 28.34 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 29.87 | 27.49 |
| Zm00001d014648_P001 | Maize | nucleus | 21.64 | 27.47 |
| KRH04949 | Soybean | extracellular, vacuole | 38.1 | 27.41 |
| KXG25581 | Sorghum | nucleus | 32.47 | 26.98 |
| Zm00001d049768_P001 | Maize | nucleus | 30.3 | 26.92 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 25.54 | 26.7 |
| Os09t0499000-01 | Rice | nucleus | 29.0 | 25.87 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 29.0 | 25.67 |
| Zm00001d031545_P001 | Maize | nucleus | 29.87 | 25.37 |
| Zm00001d021006_P001 | Maize | nucleus | 28.14 | 25.19 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 29.87 | 25.18 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 29.44 | 24.64 |
| EER88891 | Sorghum | nucleus | 23.38 | 24.55 |
| Zm00001d036499_P001 | Maize | nucleus | 22.94 | 24.42 |
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 29.0 | 24.36 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 29.0 | 24.19 |
| EER99130 | Sorghum | nucleus | 26.84 | 24.12 |
| Zm00001d006059_P001 | Maize | nucleus | 25.97 | 22.9 |
| Os06t0698748-02 | Rice | nucleus | 22.51 | 22.81 |
| TraesCS7D01G416800.1 | Wheat | nucleus | 21.21 | 21.88 |
| TraesCS7B01G325100.1 | Wheat | nucleus | 21.21 | 21.68 |
| TraesCS7A01G424800.1 | Wheat | nucleus | 21.21 | 21.59 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 30.74 | 21.58 |
Protein Annotations
| EnsemblPlants:CDY19822 | EnsemblPlantsGene:GSBRNA2T00009582001 | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF15 | ProteinID:CDY19822 | ProteinID:CDY19822.1 |
| SEG:seg | UniParc:UPI0004EEBB99 | UniProt:A0A078G4A4 | MapMan:35.2 | : | : |
Description
BnaA09g04750DBnaA09g04750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4A4]
Coordinates
chrLK032100:+:535442..536615
Molecular Weight (calculated)
25314.2 Da
IEP (calculated)
4.045
GRAVY (calculated)
-1.094
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMAGGPTF SIEDSEYGSD LTATMRDKAS SSSSSFDTVN DDGGGLSRVG SGIWSGQTAD YSSESSSIGT PGDSEEEEEE ESEDDDDSSK EIGLRGLASM
101: SSLEDSLPNK RGLSNHYKGK SKSFGNLGEI GSVKEVPKQE NPLNKRRRLQ ICNKLARRSF YSWQNPKSMP LLPVNEDEDD DDDDDDEEEG DDEERGGTRG
201: VVIARNSSFK NRAFKSRSCF ALSDLQEEED E
101: SSLEDSLPNK RGLSNHYKGK SKSFGNLGEI GSVKEVPKQE NPLNKRRRLQ ICNKLARRSF YSWQNPKSMP LLPVNEDEDD DDDDDDEEEG DDEERGGTRG
201: VVIARNSSFK NRAFKSRSCF ALSDLQEEED E
001: MELMAKPTFS IEVSQYGTTD LPATEKASSS SSSFETTNEE GVEESGLSRI WSGQTADYSS DSSSIGTPGD SEEDEEESEN ENDDVSSKEL GLRGLASMSS
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ
Arabidopsis Description
At5g24890 [Source:UniProtKB/TrEMBL;Acc:Q8L9W8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.