Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G277200.1 | Wheat | nucleus | 60.23 | 63.16 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 59.46 | 62.35 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 59.85 | 61.75 |
| Zm00001d021006_P001 | Maize | nucleus | 58.69 | 58.91 |
| EER99130 | Sorghum | nucleus | 57.92 | 58.37 |
| Zm00001d006059_P001 | Maize | nucleus | 58.69 | 58.02 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 51.74 | 51.34 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 57.92 | 45.59 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 38.61 | 45.25 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 38.61 | 44.44 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 38.22 | 42.49 |
| Os06t0698748-02 | Rice | nucleus | 30.5 | 34.65 |
| CDY68667 | Canola | cytosol | 18.53 | 32.0 |
| CDY19822 | Canola | nucleus | 25.87 | 29.0 |
| KRH61944 | Soybean | nucleus | 28.19 | 28.74 |
| KRH52604 | Soybean | nucleus | 27.8 | 28.57 |
| AT4G31510.1 | Thale cress | nucleus | 23.17 | 28.04 |
| Bra036527.1-P | Field mustard | nucleus | 24.71 | 27.95 |
| Solyc08g068970.2.1 | Tomato | nucleus | 18.92 | 27.68 |
| CDX72307 | Canola | nucleus | 22.39 | 27.1 |
| CDX87106 | Canola | nucleus | 23.94 | 26.96 |
| AT2G24550.1 | Thale cress | nucleus | 25.1 | 26.53 |
| Bra020475.1-P | Field mustard | nucleus | 22.01 | 26.39 |
| PGSC0003DMT400086234 | Potato | nucleus | 17.76 | 26.14 |
| CDY05462 | Canola | nucleus | 21.62 | 26.05 |
| CDX88142 | Canola | nucleus | 22.78 | 25.99 |
| Bra009802.1-P | Field mustard | nucleus | 22.78 | 25.99 |
| AT5G24890.1 | Thale cress | nucleus | 23.94 | 25.83 |
| Bra007841.1-P | Field mustard | nucleus | 23.94 | 25.41 |
| CDY45582 | Canola | nucleus | 24.71 | 25.4 |
| CDY13436 | Canola | nucleus | 20.85 | 25.23 |
| Bra024004.1-P | Field mustard | nucleus | 20.85 | 25.12 |
| CDX76805 | Canola | nucleus | 23.55 | 25.0 |
| CDY23302 | Canola | nucleus | 21.24 | 25.0 |
| Bra010233.1-P | Field mustard | nucleus | 21.24 | 25.0 |
| Bra032085.1-P | Field mustard | nucleus | 24.71 | 24.81 |
| CDY20324 | Canola | nucleus | 24.71 | 24.81 |
| CDY55465 | Canola | nucleus | 22.39 | 24.79 |
| CDY05394 | Canola | nucleus | 20.85 | 24.66 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 16.22 | 24.42 |
| Bra031516.1-P | Field mustard | nucleus | 18.92 | 23.9 |
| CDY36435 | Canola | nucleus | 20.08 | 23.64 |
| KRH04949 | Soybean | extracellular, vacuole | 25.87 | 20.87 |
Protein Annotations
| EMBL:AK060116 | EnsemblPlants:Os09t0499000-01 | EnsemblPlantsGene:Os09g0499000 | EntrezGene:4347474 | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF4 |
| ProteinID:BAF25484.1 | ProteinID:BAT08798.1 | RefSeq:XP_015612642.1 | SEG:seg | UniParc:UPI0000DD97CD | UniProt:Q0J0U2 |
| MapMan:35.2 | : | : | : | : | : |
Description
SnRK1A-interacting negative regulator 1SnRK1A protein kinase-interacting negative regulator, Repression of sugar/nutrient starvation signaling (Os09t0499000-01)
Coordinates
chr9:-:19303054..19304934
Molecular Weight (calculated)
27617.7 Da
IEP (calculated)
4.351
GRAVY (calculated)
-0.735
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAVADVPP AAAYGFPGSA KRGKPEEVVV LMGKRRNEGF FIEEEEEEEE VLTESSSIGA PSPASSSIGE NSGEEEGGDD EEEVESKLKA EDEQVGLGCL
101: DALEESLPIK RGLSNFYAGK SKSFTSLAEA TASPAAAANE LAKPENPFNK RRRILATWSR RASCSSLATA TYLPPLLAPD HAVAEGDEGE EEDDDSDDDE
201: RQHRGKNGGR RESAAPPLPL PPPRLTLHTQ MGGMVRRNGT FRSPRSLSLS DLQNSGGSC
101: DALEESLPIK RGLSNFYAGK SKSFTSLAEA TASPAAAANE LAKPENPFNK RRRILATWSR RASCSSLATA TYLPPLLAPD HAVAEGDEGE EEDDDSDDDE
201: RQHRGKNGGR RESAAPPLPL PPPRLTLHTQ MGGMVRRNGT FRSPRSLSLS DLQNSGGSC
001: MEVMVGSSFG IGMAAYVRDH RGVSAQDKAV QTALFLADES GRGGSQIGIG LRMSNNNNKS PEESSDSSSS IGESSENEEE EEEDDAVSCQ RGTLDSFSSS
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
Arabidopsis Description
At2g24550/F25P17.15 [Source:UniProtKB/TrEMBL;Acc:Q945P6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.