Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 63.6 | 60.36 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 63.98 | 60.29 |
| KXG25581 | Sorghum | nucleus | 63.98 | 60.07 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 62.45 | 59.49 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 62.07 | 58.7 |
| Zm00001d049768_P001 | Maize | nucleus | 58.24 | 58.46 |
| Zm00001d031545_P001 | Maize | nucleus | 60.92 | 58.46 |
| Os09t0499000-01 | Rice | nucleus | 51.34 | 51.74 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 41.38 | 48.0 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 39.85 | 47.06 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 40.23 | 45.06 |
| Os06t0698748-02 | Rice | nucleus | 29.5 | 33.77 |
| CDY68667 | Canola | cytosol | 19.16 | 33.33 |
| PGSC0003DMT400086234 | Potato | nucleus | 20.69 | 30.68 |
| CDX87106 | Canola | nucleus | 26.82 | 30.43 |
| CDY23302 | Canola | nucleus | 25.29 | 30.0 |
| Bra010233.1-P | Field mustard | nucleus | 25.29 | 30.0 |
| Bra031516.1-P | Field mustard | nucleus | 23.37 | 29.76 |
| Bra036527.1-P | Field mustard | nucleus | 26.05 | 29.69 |
| CDY55465 | Canola | nucleus | 26.44 | 29.49 |
| CDX72307 | Canola | nucleus | 24.14 | 29.44 |
| AT5G24890.1 | Thale cress | nucleus | 26.82 | 29.17 |
| Bra009802.1-P | Field mustard | nucleus | 25.29 | 29.07 |
| CDX88142 | Canola | nucleus | 25.29 | 29.07 |
| CDY19822 | Canola | nucleus | 25.67 | 29.0 |
| Solyc08g068970.2.1 | Tomato | nucleus | 19.54 | 28.81 |
| Bra032085.1-P | Field mustard | nucleus | 28.35 | 28.68 |
| Bra024004.1-P | Field mustard | nucleus | 23.37 | 28.37 |
| Bra020475.1-P | Field mustard | nucleus | 23.37 | 28.24 |
| CDY36435 | Canola | nucleus | 23.75 | 28.18 |
| CDY13436 | Canola | nucleus | 22.99 | 28.04 |
| KRH61944 | Soybean | nucleus | 27.2 | 27.95 |
| CDY05462 | Canola | nucleus | 22.99 | 27.91 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 18.39 | 27.91 |
| CDY45582 | Canola | nucleus | 26.82 | 27.78 |
| AT2G24550.1 | Thale cress | nucleus | 26.05 | 27.76 |
| AT4G31510.1 | Thale cress | nucleus | 22.61 | 27.57 |
| CDY05394 | Canola | nucleus | 22.99 | 27.4 |
| Bra007841.1-P | Field mustard | nucleus | 25.29 | 27.05 |
| KRH52604 | Soybean | nucleus | 26.05 | 26.98 |
| CDY20324 | Canola | nucleus | 26.44 | 26.74 |
| CDX76805 | Canola | nucleus | 24.9 | 26.64 |
| KRH04949 | Soybean | extracellular, vacuole | 24.52 | 19.94 |
Protein Annotations
| EnsemblPlants:Os08t0516900-01 | EnsemblPlantsGene:Os08g0516900 | EntrezGene:4346036 | ncoils:Coil | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF4 |
| ProteinID:BAC56799.1 | ProteinID:BAC57311.1 | ProteinID:BAF24153.1 | ProteinID:BAT06243.1 | RefSeq:XP_015648314.1 | SEG:seg |
| UniParc:UPI0000004617 | UniProt:Q84JT9 | MapMan:35.2 | : | : | : |
Description
SnRK1A-interacting negative regulator 2SnRK1A protein kinase-interacting negative regulator, Repression of sugar/nutrient starvation signaling (Os08t0516900-01)
Coordinates
chr8:+:25643614..25645276
Molecular Weight (calculated)
27621.3 Da
IEP (calculated)
4.317
GRAVY (calculated)
-0.721
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAVARGGM MPAGHGFGKG KAAAVEEEED EVNGFFVEEE EEEEEEEEAA VSDASSIGAA SSDSSSIGEN SSSEKEGEEE GEEVESKAKE VAVEVEGGGL
101: GFHGLGTLES LEDALPIKRG LSNFYAGKSK SFTSLAEAAA KAAAKEIAKP ENPFNKRRRV LAAWSRRRAS CSSLATTYLP PLLAPDHAVV EEEDEEDDSD
201: AEQCSGSGGG NRRREPTFPP PRLSLHAQKS SLTPRSSNPA SSFRSPRSFS LSDLQNAGSY N
101: GFHGLGTLES LEDALPIKRG LSNFYAGKSK SFTSLAEAAA KAAAKEIAKP ENPFNKRRRV LAAWSRRRAS CSSLATTYLP PLLAPDHAVV EEEDEEDDSD
201: AEQCSGSGGG NRRREPTFPP PRLSLHAQKS SLTPRSSNPA SSFRSPRSFS LSDLQNAGSY N
001: MEVMVGSSFG IGMAAYVRDH RGVSAQDKAV QTALFLADES GRGGSQIGIG LRMSNNNNKS PEESSDSSSS IGESSENEEE EEEDDAVSCQ RGTLDSFSSS
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE
Arabidopsis Description
At2g24550/F25P17.15 [Source:UniProtKB/TrEMBL;Acc:Q945P6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.