Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23302 | Canola | nucleus | 90.45 | 90.45 |
| Bra031516.1-P | Field mustard | nucleus | 77.73 | 83.41 |
| CDY13436 | Canola | nucleus | 58.64 | 60.28 |
| CDX72307 | Canola | nucleus | 58.18 | 59.81 |
| AT4G31510.1 | Thale cress | nucleus | 57.73 | 59.35 |
| CDY45582 | Canola | nucleus | 52.27 | 45.63 |
| CDY68667 | Canola | cytosol | 30.0 | 44.0 |
| CDY20324 | Canola | nucleus | 51.36 | 43.8 |
| CDX76805 | Canola | nucleus | 47.73 | 43.03 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 26.36 | 33.72 |
| CDX87106 | Canola | nucleus | 35.0 | 33.48 |
| CDX88142 | Canola | nucleus | 33.64 | 32.6 |
| CDY19822 | Canola | nucleus | 33.64 | 32.03 |
| CDY05462 | Canola | nucleus | 30.91 | 31.63 |
| CDY55465 | Canola | nucleus | 33.64 | 31.62 |
| CDY05394 | Canola | nucleus | 31.36 | 31.51 |
| PGSC0003DMT400086234 | Potato | nucleus | 22.73 | 28.41 |
| Solyc08g068970.2.1 | Tomato | nucleus | 22.27 | 27.68 |
| KRH61944 | Soybean | nucleus | 31.36 | 27.17 |
| KRH52604 | Soybean | nucleus | 30.0 | 26.19 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 25.45 | 25.34 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 25.45 | 24.03 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 24.55 | 24.0 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 28.18 | 23.75 |
| Zm00001d014648_P001 | Maize | nucleus | 19.55 | 23.63 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 26.36 | 23.48 |
| TraesCS5B01G277200.1 | Wheat | nucleus | 26.36 | 23.48 |
| TraesCS7B01G325100.1 | Wheat | nucleus | 24.09 | 23.45 |
| TraesCS7D01G416800.1 | Wheat | nucleus | 23.64 | 23.21 |
| TraesCS7A01G424800.1 | Wheat | nucleus | 23.64 | 22.91 |
| EER88891 | Sorghum | nucleus | 22.73 | 22.73 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 25.45 | 22.31 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 27.73 | 22.1 |
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 26.82 | 21.45 |
| Zm00001d031545_P001 | Maize | nucleus | 25.91 | 20.96 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 25.91 | 20.58 |
| Zm00001d021006_P001 | Maize | nucleus | 24.09 | 20.54 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 25.45 | 20.44 |
| Zm00001d036499_P001 | Maize | nucleus | 20.0 | 20.28 |
| Zm00001d006059_P001 | Maize | nucleus | 24.09 | 20.23 |
| Os09t0499000-01 | Rice | nucleus | 23.64 | 20.08 |
| EER99130 | Sorghum | nucleus | 23.18 | 19.84 |
| KXG25581 | Sorghum | nucleus | 25.0 | 19.78 |
| Zm00001d049768_P001 | Maize | nucleus | 23.18 | 19.62 |
| Os06t0698748-02 | Rice | nucleus | 19.55 | 18.86 |
| KRH04949 | Soybean | extracellular, vacuole | 27.27 | 18.69 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 25.45 | 17.02 |
Protein Annotations
| EnsemblPlants:CDY36435 | EnsemblPlantsGene:GSBRNA2T00062064001 | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF15 | ProteinID:CDY36435 | ProteinID:CDY36435.1 |
| SEG:seg | UniParc:UPI0004EDFDF3 | UniProt:A0A078HDJ2 | MapMan:35.2 | : | : |
Description
BnaC03g67550DBnaC03g67550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDJ2]
Coordinates
chrLK032376:+:20664..21417
Molecular Weight (calculated)
24233.0 Da
IEP (calculated)
5.194
GRAVY (calculated)
-0.679
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFLAGSTFE AGTAVQDKAA PAALFLTEES SRGGSGIGLR RCVKSLSEEI SESSSSSVVV SGESSANEEE DGAVSSRGTW FGSSLEDSLP IKRGLSNHYI
101: GKSKSFGNLF EASNSKDLEK VESPLNKRRR LLIANKLRRS PLSSFSIYSK TNNNLNSMPL LALQESNEED HKFSYDNDDS SDDETSKLQE KRMKMTTNNR
201: DFMVQTHSCL CLTSFRDADR
101: GKSKSFGNLF EASNSKDLEK VESPLNKRRR LLIANKLRRS PLSSFSIYSK TNNNLNSMPL LALQESNEED HKFSYDNDDS SDDETSKLQE KRMKMTTNNR
201: DFMVQTHSCL CLTSFRDADR
001: MEVLVGSTFR DRSSVTTHDQ AVPASLSSRI GLRRCGRSPP PESSSSVGET SENEEDEDDA VSSSQGRWLN SFSSSLEDSL PIKRGLSNHY IGKSKSFGNL
101: MEASNTNDLV KVESPLNKRR RLLIANKLRR RSSLSSFSIY TKINPNSMPL LALQESDNED HKLNDDDDDD DSSSDDETSK LKEKRMKMTN HRDFMVPQTK
201: SCFSLTSFQD DDDR
101: MEASNTNDLV KVESPLNKRR RLLIANKLRR RSSLSSFSIY TKINPNSMPL LALQESDNED HKLNDDDDDD DSSSDDETSK LKEKRMKMTN HRDFMVPQTK
201: SCFSLTSFQD DDDR
Arabidopsis Description
Major centromere autoantigen B-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SV19]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.