Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020475.1-P | Field mustard | nucleus | 100.0 | 99.54 |
| CDY05394 | Canola | nucleus | 90.23 | 88.58 |
| CDX88142 | Canola | nucleus | 72.09 | 68.28 |
| CDY19822 | Canola | nucleus | 66.51 | 61.9 |
| CDY55465 | Canola | nucleus | 66.98 | 61.54 |
| CDX87106 | Canola | nucleus | 65.58 | 61.3 |
| AT5G24890.1 | Thale cress | nucleus | 61.86 | 55.42 |
| CDY68667 | Canola | cytosol | 25.58 | 36.67 |
| CDY20324 | Canola | nucleus | 42.79 | 35.66 |
| CDY45582 | Canola | nucleus | 41.4 | 35.32 |
| CDX76805 | Canola | nucleus | 40.0 | 35.25 |
| KRH61944 | Soybean | nucleus | 40.0 | 33.86 |
| CDX72307 | Canola | nucleus | 33.02 | 33.18 |
| KRH52604 | Soybean | nucleus | 38.6 | 32.94 |
| CDY13436 | Canola | nucleus | 31.63 | 31.78 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 25.12 | 31.4 |
| CDY36435 | Canola | nucleus | 31.63 | 30.91 |
| CDY23302 | Canola | nucleus | 31.16 | 30.45 |
| Solyc08g068970.2.1 | Tomato | nucleus | 24.19 | 29.38 |
| PGSC0003DMT400086234 | Potato | nucleus | 23.72 | 28.98 |
| KRH04949 | Soybean | extracellular, vacuole | 43.26 | 28.97 |
| Zm00001d014648_P001 | Maize | nucleus | 23.26 | 27.47 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 26.98 | 26.24 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 27.91 | 25.75 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 26.51 | 25.33 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 28.37 | 24.7 |
| TraesCS5B01G277200.1 | Wheat | nucleus | 28.37 | 24.7 |
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 31.16 | 24.36 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 27.91 | 23.9 |
| Zm00001d021006_P001 | Maize | nucleus | 28.37 | 23.64 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 30.23 | 23.55 |
| Zm00001d031545_P001 | Maize | nucleus | 29.77 | 23.53 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 30.23 | 23.47 |
| EER88891 | Sorghum | nucleus | 23.72 | 23.18 |
| Zm00001d049768_P001 | Maize | nucleus | 27.91 | 23.08 |
| KXG25581 | Sorghum | nucleus | 29.77 | 23.02 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 27.91 | 22.99 |
| EER99130 | Sorghum | nucleus | 27.44 | 22.96 |
| Zm00001d036499_P001 | Maize | nucleus | 22.79 | 22.58 |
| TraesCS7A01G424800.1 | Wheat | nucleus | 23.72 | 22.47 |
| TraesCS7D01G416800.1 | Wheat | nucleus | 23.26 | 22.32 |
| TraesCS7B01G325100.1 | Wheat | nucleus | 23.26 | 22.12 |
| Os09t0499000-01 | Rice | nucleus | 26.05 | 21.62 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 27.44 | 21.53 |
| Zm00001d006059_P001 | Maize | nucleus | 26.05 | 21.37 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 29.3 | 19.15 |
| Os06t0698748-02 | Rice | nucleus | 20.0 | 18.86 |
Protein Annotations
| EnsemblPlants:CDY05462 | EnsemblPlantsGene:GSBRNA2T00120377001 | PANTHER:PTHR33172 | PANTHER:PTHR33172:SF15 | ProteinID:CDY05462 | ProteinID:CDY05462.1 |
| SEG:seg | UniParc:UPI00000068A6 | UniProt:Q84U09 | MapMan:35.2 | : | : |
Description
BnaA02g32290DBnaA02g32290D protein [Source:UniProtKB/TrEMBL;Acc:Q84U09]
Coordinates
chrLK031962:-:263660..264783
Molecular Weight (calculated)
23506.4 Da
IEP (calculated)
4.068
GRAVY (calculated)
-1.049
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGPTFSI ELSAYGSDLP TDKASGDIPN EEGSGLSRVG SGIWSGRTVD YSSESSSSIG TPGDSEEEDE ESEEDNDEEE LGLASLRSLE DSLPSKGLSS
101: HYKGKSKSFG NLGEIGSVKE VPKQENPLNK KRRLQIYNKL ARKSFYSWQN PKSMPLLPVH EDNDDEEGDD GDLSDEERGG DVLARRPSFK NRALKSMSCF
201: ALSDLQEEEE EEEDE
101: HYKGKSKSFG NLGEIGSVKE VPKQENPLNK KRRLQIYNKL ARKSFYSWQN PKSMPLLPVH EDNDDEEGDD GDLSDEERGG DVLARRPSFK NRALKSMSCF
201: ALSDLQEEEE EEEDE
001: MELMAKPTFS IEVSQYGTTD LPATEKASSS SSSFETTNEE GVEESGLSRI WSGQTADYSS DSSSIGTPGD SEEDEEESEN ENDDVSSKEL GLRGLASMSS
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ
Arabidopsis Description
At5g24890 [Source:UniProtKB/TrEMBL;Acc:Q8L9W8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.