Factsheet for HORVU7Hr1G052580.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G051660.10
HORVU3Hr1G095080.3
HORVU3Hr1G095090.1
HORVU3Hr1G095200.4
HORVU3Hr1G095240.2
HORVU4Hr1G085370.1
HORVU4Hr1G085450.1
HORVU6Hr1G002270.1
HORVU6Hr1G002330.14
HORVU6Hr1G075650.1
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2
HORVU7Hr1G038130.1
HORVU7Hr1G054320.2
HORVU7Hr1G054390.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24550.1	HORVU1Hr1G051660.10	AT2G45660.1	21798944
AT2G24550.1	HORVU3Hr1G095080.3	AT2G45660.1	21798944
AT2G24550.1	HORVU3Hr1G095090.1	AT2G45660.1	21798944
AT2G24550.1	HORVU3Hr1G095200.4	AT2G45660.1	21798944
AT2G24550.1	HORVU3Hr1G095240.2	AT2G45660.1	21798944
AT2G24550.1	HORVU4Hr1G085370.1	AT2G45660.1	21798944
AT2G24550.1	HORVU4Hr1G085450.1	AT2G45660.1	21798944
AT2G24550.1	HORVU6Hr1G002270.1	AT2G45660.1	21798944
AT2G24550.1	HORVU6Hr1G002330.14	AT2G45660.1	21798944
AT2G24550.1	HORVU7Hr1G054320.2	AT2G45660.1	21798944
AT2G24550.1	HORVU7Hr1G054390.1	AT2G45660.1	21798944
AT2G24550.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT2G24550.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT2G24550.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT2G24550.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT2G24550.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT2G24550.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT2G24550.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G254500.1	Wheat	mitochondrion, nucleus	82.85	82.25
TraesCS7B01G150700.1	Wheat	mitochondrion, nucleus	81.39	80.51
TraesCS7D01G253100.1	Wheat	mitochondrion, nucleus	79.93	79.64
Os08t0516900-01	Rice	nucleus, plasma membrane	59.49	62.45
KXG25581	Sorghum	nucleus	56.93	56.12
Zm00001d049768_P001	Maize	nucleus	52.19	55.0
Zm00001d031545_P001	Maize	nucleus	52.19	52.57
GSMUA_Achr9P13850_001	Banana	nucleus	37.59	45.78
GSMUA_Achr3P05640_001	Banana	nucleus	38.69	45.49
GSMUA_Achr7P15940_001	Banana	nucleus	35.77	44.34
HORVU5Hr1G075200.2	Barley	golgi, plastid	45.62	37.99
CDY68667	Canola	cytosol	17.52	32.0
CDX87106	Canola	nucleus	25.18	30.0
CDX72307	Canola	nucleus	23.36	29.91
CDY19822	Canola	nucleus	25.18	29.87
AT4G31510.1	Thale cress	nucleus	22.99	29.44
Solyc08g068970.2.1	Tomato	nucleus	18.98	29.38
Bra024004.1-P	Field mustard	nucleus	22.63	28.84
Bra036527.1-P	Field mustard	nucleus	24.09	28.82
CDY55465	Canola	nucleus	24.45	28.63
CDY13436	Canola	nucleus	22.26	28.5
VIT_01s0113g00410.t01	Wine grape	mitochondrion, nucleus	17.88	28.49
PGSC0003DMT400086234	Potato	nucleus	18.25	28.41
Bra009802.1-P	Field mustard	nucleus	23.36	28.19
CDX88142	Canola	nucleus	23.36	28.19
KRH52604	Soybean	nucleus	25.91	28.17
AT2G24550.1	Thale cress	nucleus	25.18	28.16
KRH61944	Soybean	nucleus	25.91	27.95
Bra020475.1-P	Field mustard	nucleus	21.9	27.78
CDY05462	Canola	nucleus	21.53	27.44
Bra031516.1-P	Field mustard	nucleus	20.44	27.32
Bra032085.1-P	Field mustard	nucleus	25.55	27.13
CDY45582	Canola	nucleus	24.82	26.98
CDY05394	Canola	nucleus	21.53	26.94
AT5G24890.1	Thale cress	nucleus	23.36	26.67
Bra007841.1-P	Field mustard	nucleus	23.72	26.64
CDY23302	Canola	nucleus	20.8	25.91
Bra010233.1-P	Field mustard	nucleus	20.8	25.91
CDY20324	Canola	nucleus	24.09	25.58
CDY36435	Canola	nucleus	20.44	25.45
CDX76805	Canola	nucleus	22.63	25.41
KRH04949	Soybean	extracellular, vacuole	23.36	19.94

Protein Annotations

EnsemblPlants:HORVU7Hr1G052580.1	EnsemblPlantsGene:HORVU7Hr1G052580	PANTHER:PTHR33172	PANTHER:PTHR33172:SF4	SEG:seg	UniParc:UPI000B46B380
UniProt:A0A287WI04	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:201214148..201216151

Molecular Weight (calculated)

29687.6 Da

IEP (calculated)

4.463

GRAVY (calculated)

-0.935

Length

274 amino acids

Sequence
(BLAST)

001: MSTAVAPGMA RAHGFRGAGK GNQRPDSEEL ERNHNGFYAD EEEVGREELR ELEEALSDAS SIGAASSDSS SIGEDSSSEK EEEEDVESEA KAPVDEVLAM
101: GLGTLESLED ALPSKRGLSN FYAGKSKSFT SLAEAAAKAA AKEIAKPENP FNKRRRVLAA WSRRRASCSS LVTTYLPPLL SLDHTVVEGD ENEEEEEEED
201: RSEEDDGDDE GNGSGKGRRE KAPASPRFPP PRRTLHSASQ KASVMSRNMN LPNTSSFRSP RSFSLSDLQN AGYN

Best Arabidopsis Sequence Match ( AT2G24550.1 )
(BLAST)

001: MEVMVGSSFG IGMAAYVRDH RGVSAQDKAV QTALFLADES GRGGSQIGIG LRMSNNNNKS PEESSDSSSS IGESSENEEE EEEDDAVSCQ RGTLDSFSSS
101: LEDSLPIKRG LSNHYVGKSK SFGNLMEAAS KAKDLEKVEN PFNKRRRLVI ANKLRRRGRS MSASNFYSWQ NPNSMPLLAL QEPNEEDHHI HNDDYEDDDG
201: DGDDHRKIMM MMKNKKELMA QTRSCFCLSS LQEEDDGDGD DDEDE

Arabidopsis Description

At2g24550/F25P17.15 [Source:UniProtKB/TrEMBL;Acc:Q945P6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.