Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19822 | Canola | nucleus | 95.2 | 94.37 |
| Bra009802.1-P | Field mustard | nucleus | 71.62 | 72.25 |
| AT5G24890.1 | Thale cress | nucleus | 72.93 | 69.58 |
| Bra020475.1-P | Field mustard | nucleus | 65.07 | 68.98 |
| Bra007841.1-P | Field mustard | nucleus | 42.36 | 39.75 |
| Bra032085.1-P | Field mustard | nucleus | 41.48 | 36.82 |
| KRH52604 | Soybean | nucleus | 38.86 | 35.32 |
| VIT_01s0113g00410.t01 | Wine grape | mitochondrion, nucleus | 26.2 | 34.88 |
| KRH61944 | Soybean | nucleus | 38.43 | 34.65 |
| Bra024004.1-P | Field mustard | nucleus | 32.31 | 34.42 |
| Bra031516.1-P | Field mustard | nucleus | 30.57 | 34.15 |
| Bra010233.1-P | Field mustard | nucleus | 32.75 | 34.09 |
| PGSC0003DMT400086234 | Potato | nucleus | 24.45 | 31.82 |
| Solyc08g068970.2.1 | Tomato | nucleus | 23.58 | 30.51 |
| GSMUA_Achr3P05640_001 | Banana | nucleus | 30.57 | 30.04 |
| GSMUA_Achr9P13850_001 | Banana | nucleus | 27.95 | 28.44 |
| KRH04949 | Soybean | extracellular, vacuole | 39.3 | 28.04 |
| Zm00001d014648_P001 | Maize | nucleus | 22.27 | 28.02 |
| TraesCS5D01G284800.1 | Wheat | nucleus | 30.13 | 27.94 |
| TraesCS5B01G277200.1 | Wheat | nucleus | 29.69 | 27.53 |
| Zm00001d031545_P001 | Maize | nucleus | 31.88 | 26.84 |
| GSMUA_Achr7P15940_001 | Banana | nucleus | 25.76 | 26.7 |
| TraesCS5A01G277500.1 | Wheat | nucleus | 29.26 | 26.69 |
| Zm00001d049768_P001 | Maize | nucleus | 29.69 | 26.15 |
| Os08t0516900-01 | Rice | nucleus, plasma membrane | 29.69 | 26.05 |
| KXG25581 | Sorghum | nucleus | 31.44 | 25.9 |
| EER88891 | Sorghum | nucleus | 24.45 | 25.45 |
| Zm00001d021006_P001 | Maize | nucleus | 27.95 | 24.81 |
| Os09t0499000-01 | Rice | nucleus | 27.95 | 24.71 |
| Zm00001d036499_P001 | Maize | nucleus | 23.14 | 24.42 |
| HORVU7Hr1G052580.1 | Barley | nucleus | 28.82 | 24.09 |
| TraesCS7D01G253100.1 | Wheat | mitochondrion, nucleus | 28.82 | 24.0 |
| TraesCS7A01G254500.1 | Wheat | mitochondrion, nucleus | 28.38 | 23.55 |
| TraesCS7B01G150700.1 | Wheat | mitochondrion, nucleus | 27.95 | 23.1 |
| EER99130 | Sorghum | nucleus | 25.76 | 22.96 |
| Os06t0698748-02 | Rice | nucleus | 22.71 | 22.81 |
| Zm00001d006059_P001 | Maize | nucleus | 25.33 | 22.14 |
| TraesCS7D01G416800.1 | Wheat | nucleus | 21.4 | 21.88 |
| TraesCS7A01G424800.1 | Wheat | nucleus | 21.4 | 21.59 |
| TraesCS7B01G325100.1 | Wheat | nucleus | 20.96 | 21.24 |
| HORVU5Hr1G075200.2 | Barley | golgi, plastid | 30.13 | 20.97 |
Protein Annotations
Description
AT5G24890 (E=2e-059) | unknown protein
Coordinates
chrA09:-:1593878..1594642
Molecular Weight (calculated)
25098.1 Da
IEP (calculated)
4.084
GRAVY (calculated)
-1.062
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMAGGPTF SIEDSEYGSD LSATMRDKAS SSSSSFDTVN DDGGGLSRVG SGIWSGQTVD YSSESSSIGT PGDSEEEEEE ESEDDDDSSK EIGLRGLASM
101: SSLEDSLPNK RGLSNHYKGK SKSFGNLGEI GSVKEVPKQE NPLNKRRRLQ ICNKLARRSF YSWQNPKSMP LLPVNEDEDD DDDDEEEGDD EERGGTRGVV
201: IARNSSFKNR AFKSRSCFAL SDLQEEEDE
101: SSLEDSLPNK RGLSNHYKGK SKSFGNLGEI GSVKEVPKQE NPLNKRRRLQ ICNKLARRSF YSWQNPKSMP LLPVNEDEDD DDDDEEEGDD EERGGTRGVV
201: IARNSSFKNR AFKSRSCFAL SDLQEEEDE
001: MELMAKPTFS IEVSQYGTTD LPATEKASSS SSSFETTNEE GVEESGLSRI WSGQTADYSS DSSSIGTPGD SEEDEEESEN ENDDVSSKEL GLRGLASMSS
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ
101: LEDSLPSKRG LSNHYKGKSK SFGNLGEIGS VKEVAKQENP LNKRRRLQIC NKLARKSFYS WQNPKSMPLL PVNEDEDDDD EDDDEEDLKS GFDENKSSSD
201: EEGVKKVVVR KGSFKNRAYK SRSCFALSDL IEEEDDDDDQ
Arabidopsis Description
At5g24890 [Source:UniProtKB/TrEMBL;Acc:Q8L9W8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.