Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07255 | Sorghum | nucleus | 92.25 | 92.71 |
| Zm00001d052256_P001 | Maize | cytosol, nucleus, peroxisome | 87.75 | 90.23 |
| Os02t0747400-01 | Rice | nucleus | 87.5 | 85.37 |
| Zm00001d037221_P001 | Maize | cytosol, nucleus, peroxisome | 68.75 | 72.56 |
| Zm00001d044836_P001 | Maize | nucleus | 58.5 | 65.55 |
| GSMUA_Achr4P00500_001 | Banana | nucleus | 44.5 | 65.44 |
| GSMUA_Achr7P20990_001 | Banana | nucleus | 42.25 | 63.06 |
| VIT_17s0000g06020.t01 | Wine grape | nucleus | 47.5 | 51.63 |
| CDY36943 | Canola | nucleus | 22.5 | 47.62 |
| PGSC0003DMT400083148 | Potato | nucleus | 47.25 | 46.1 |
| Solyc03g116320.2.1 | Tomato | nucleus | 46.75 | 45.72 |
| Solyc06g070900.2.1 | Tomato | nucleus | 47.25 | 45.43 |
| PGSC0003DMT400001613 | Potato | nucleus | 47.0 | 45.41 |
| KRH56919 | Soybean | nucleus | 46.5 | 44.71 |
| KRH03466 | Soybean | nucleus | 45.0 | 43.58 |
| KRH63357 | Soybean | nucleus | 43.0 | 43.22 |
| KRH54542 | Soybean | nucleus | 43.5 | 42.65 |
| CDY24170 | Canola | nucleus | 25.75 | 42.39 |
| Zm00001d018530_P001 | Maize | plastid | 19.5 | 37.68 |
| Bra018126.1-P | Field mustard | nucleus | 43.25 | 37.12 |
| AT3G47620.1 | Thale cress | nucleus | 44.5 | 36.4 |
| Zm00001d025033_P001 | Maize | plastid | 14.75 | 33.52 |
| Zm00001d025896_P001 | Maize | plastid | 16.5 | 31.88 |
| Zm00001d051216_P001 | Maize | plastid | 17.25 | 31.65 |
| Zm00001d017350_P001 | Maize | plastid | 17.25 | 31.36 |
| Zm00001d011985_P001 | Maize | nucleus | 23.25 | 29.52 |
| Zm00001d053020_P001 | Maize | cytosol, nucleus, plastid | 28.25 | 29.2 |
| Zm00001d042305_P001 | Maize | cytosol, mitochondrion, nucleus | 23.25 | 28.7 |
| Zm00001d023565_P001 | Maize | nucleus | 28.0 | 27.65 |
| Zm00001d041866_P001 | Maize | nucleus | 27.25 | 26.2 |
| Zm00001d006165_P001 | Maize | nucleus | 21.25 | 25.76 |
| Zm00001d031725_P001 | Maize | nucleus | 22.5 | 25.71 |
| Zm00001d004791_P001 | Maize | mitochondrion, nucleus | 13.0 | 25.37 |
| Zm00001d031597_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 17.25 | 25.0 |
| Zm00001d038444_P001 | Maize | nucleus | 16.75 | 22.56 |
| Zm00001d044344_P001 | Maize | nucleus | 16.5 | 22.22 |
Protein Annotations
| EntrezGene:103627725 | MapMan:15.5.19 | UniProt:A0A060CYI1 | ProteinID:AIB05551.1 | ProteinID:AQK74880.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | PFAM:PF03634 | PFscan:PS51369 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF40 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0001B3427C | EnsemblPlantsGene:Zm00001d018045 |
| EnsemblPlants:Zm00001d018045_P001 | EnsemblPlants:Zm00001d018045_T001 | SEG:seg | : | : | : |
Description
TCP-transcription factor 26Transcription factor TCP14
Coordinates
chr5:+:212792080..212793282
Molecular Weight (calculated)
40490.1 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.444
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAGDGGGG RRPNFPLQLL EKKEEQPCSI SAAVGASAGG NGNGSGAVGG EMQQVRKAAP KRSSTKDRHT KVEGRGRRIR MPALCAARVF QLTRELGHKT
101: DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG SSFSAPAHLR AALPASPATA ARFGRADAWD RVVGLAFPSE GPASSSSSPS PLLLNFNSGS
201: VGLDAQQSPS AAAAAAAADM TRKRRWEQEM QQQQQQQAQQ YQQQMAGYTQ SQMPGTVWMV PSSNNTQGGG TPSSGGSGGC TGESIWTFPQ MGSATAAAAV
301: YRGSVPSGLH FMNFPAPVAL LPGQQLGLGS VGGGGGGSGG GSGGEGHMGI LAALNAYRTQ VVTDPAASQG GGGGGGGSGQ QQQHGGGRGD RHESMSTSDS
101: DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG SSFSAPAHLR AALPASPATA ARFGRADAWD RVVGLAFPSE GPASSSSSPS PLLLNFNSGS
201: VGLDAQQSPS AAAAAAAADM TRKRRWEQEM QQQQQQQAQQ YQQQMAGYTQ SQMPGTVWMV PSSNNTQGGG TPSSGGSGGC TGESIWTFPQ MGSATAAAAV
301: YRGSVPSGLH FMNFPAPVAL LPGQQLGLGS VGGGGGGSGG GSGGEGHMGI LAALNAYRTQ VVTDPAASQG GGGGGGGSGQ QQQHGGGRGD RHESMSTSDS
001: MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
Arabidopsis Description
TCP14Transcription factor TCP14 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.