Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92496 | Sorghum | nucleus | 71.6 | 94.33 |
| Zm00001d047834_P004 | Maize | cytosol | 68.16 | 83.9 |
| Os03t0268100-01 | Rice | nucleus | 61.79 | 80.67 |
| TraesCS4A01G093700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.76 | 79.86 |
| TraesCS4D01G211400.1 | Wheat | cytosol | 60.07 | 78.96 |
| TraesCS4B01G210700.2 | Wheat | cytosol | 59.38 | 78.77 |
| HORVU4Hr1G060500.11 | Barley | cytosol, nucleus | 55.42 | 64.92 |
| GSMUA_Achr2P16570_001 | Banana | nucleus | 43.37 | 57.4 |
| VIT_06s0004g05490.t01 | Wine grape | nucleus | 41.48 | 53.91 |
| CDY22263 | Canola | cytosol | 9.12 | 53.54 |
| AT5G59210.1 | Thale cress | nucleus | 39.07 | 52.3 |
| KRH10215 | Soybean | cytosol | 38.55 | 51.73 |
| KRH23112 | Soybean | nucleus | 38.55 | 51.73 |
| CDY02864 | Canola | extracellular, golgi, vacuole | 27.54 | 48.93 |
| Solyc09g055760.2.1 | Tomato | nucleus | 35.8 | 47.17 |
Protein Annotations
| EnsemblPlants:Zm00001d028569_P002 | EnsemblPlants:Zm00001d028569_T002 | EnsemblPlantsGene:Zm00001d028569 | ncoils:Coil | ProteinID:ONL96420.1 | SEG:seg |
| UniParc:UPI0008441AB9 | UniProt:A0A1D6JXL8 | MapMan:35.2 | : | : | : |
Description
myosin heavy chain-related
Coordinates
chr1:-:39402992..39408397
Molecular Weight (calculated)
66307.8 Da
IEP (calculated)
5.702
GRAVY (calculated)
-0.645
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAHASRGRR TLEEIRQKRA AERMQHAVPI AASHVDSHGN QRAGAEHLAR VQELENGNTE LERENKMLLS KIAEKEVEKD ALVNRLNDLE RNVVPSLKKS
101: LNDIYLEKDA AVVAKEDALA QLRSMKKRLK EAEEEQYRAE EDSASLRAQL NTLQQQMGHT YSGYTMGTSS EESVAMEKEI QDLQAQLKQE SLLRQQEQQQ
201: LAEQSQLRQQ EQEKLAKEQT RIASLEAEKQ QLEDQITMLT KKATGMEDTY TYIILSFIYV RNVRTCRRYN DEDEQLNTSP VRSQPKQKTH ANSGGGLGFV
301: LSNSGFFPDS IAMLNVFDYF TIHTIVALLP HASISMVLQS HNSQMNTPFG VLLEQKASRS YLPGCSIRLV LLTYGHLPIL EDASEFAARK AFSMQDREKL
401: EQQLHDMALM IERLEGSRQK LLMEIDSQSS EIEKLFEENS ALSASYQEAI DVTVQWENQV KFQVRDCLKQ NEELRSHLEK LRLEQVSLLK VSNIATQSDG
501: QTENSISNPP QMVIENISLK DQLIKEQSRS EGLSAEIMKL SAELRKAVHA QNNLARLYRP VLRDIESNLM KMKQETYATI Q
101: LNDIYLEKDA AVVAKEDALA QLRSMKKRLK EAEEEQYRAE EDSASLRAQL NTLQQQMGHT YSGYTMGTSS EESVAMEKEI QDLQAQLKQE SLLRQQEQQQ
201: LAEQSQLRQQ EQEKLAKEQT RIASLEAEKQ QLEDQITMLT KKATGMEDTY TYIILSFIYV RNVRTCRRYN DEDEQLNTSP VRSQPKQKTH ANSGGGLGFV
301: LSNSGFFPDS IAMLNVFDYF TIHTIVALLP HASISMVLQS HNSQMNTPFG VLLEQKASRS YLPGCSIRLV LLTYGHLPIL EDASEFAARK AFSMQDREKL
401: EQQLHDMALM IERLEGSRQK LLMEIDSQSS EIEKLFEENS ALSASYQEAI DVTVQWENQV KFQVRDCLKQ NEELRSHLEK LRLEQVSLLK VSNIATQSDG
501: QTENSISNPP QMVIENISLK DQLIKEQSRS EGLSAEIMKL SAELRKAVHA QNNLARLYRP VLRDIESNLM KMKQETYATI Q
001: MESHHASLGR RTLEEIRQKR AAQRLSKASS GPDLSEIPNP ADFPVIRKSE SGNRLSETDV GALYSQLKEL QKKNAEMEER NKILSSKLQT KEVENESLET
101: RLNVLEQNTV PSLRKALKEI AMEKDAAVVL REDLSAQVRT LKRRVNQAEE EQYRAEEDAA SLRAELNSIQ QQAMGNSFAG MSPMGVSPDQ LPILEKEMAN
201: LKLELQKESV LRQQEQHRLA EEQTRVASLM SEKQELEQKI SVLSSRASEV SESGQKVFSV EDKEKLEKQL HDMAVALERL ESSRQKLLME IDNQSSEIEK
301: LFEENSNLSA SYQESINISN QWENQVKECL KQNVELREVL DKLRTEQAGS FSRGPSEFEA NGSHGTDTLS LKGELAKEQS RAESLSAQVL QLSAQLQQAT
401: QAYNGLMRIY KPVLRNIESS LIKLKQDGSV TVAQ
101: RLNVLEQNTV PSLRKALKEI AMEKDAAVVL REDLSAQVRT LKRRVNQAEE EQYRAEEDAA SLRAELNSIQ QQAMGNSFAG MSPMGVSPDQ LPILEKEMAN
201: LKLELQKESV LRQQEQHRLA EEQTRVASLM SEKQELEQKI SVLSSRASEV SESGQKVFSV EDKEKLEKQL HDMAVALERL ESSRQKLLME IDNQSSEIEK
301: LFEENSNLSA SYQESINISN QWENQVKECL KQNVELREVL DKLRTEQAGS FSRGPSEFEA NGSHGTDTLS LKGELAKEQS RAESLSAQVL QLSAQLQQAT
401: QAYNGLMRIY KPVLRNIESS LIKLKQDGSV TVAQ
Arabidopsis Description
AT5g59210/mnc17_100 [Source:UniProtKB/TrEMBL;Acc:Q8RY08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.